Hb_074336_010

Information

Type -
Description -
Location Contig74336: 5593-6613
Sequence    

Annotation

kegg
ID dosa:Os09t0314800-00
description Os09g0314800; Similar to Receptor protein kinase PERK1.
nr
ID EEE62769.1
description hypothetical protein OsJ_17572 [Oryza sativa Japonica Group]
swissprot
ID Q9SIZ4
description Inactive receptor-like serine/threonine-protein kinase At2g40270 OS=Arabidopsis thaliana GN=At2g40270 PE=2 SV=2
trembl
ID B9FJ25
description Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_17572 PE=3 SV=1
Gene Ontology
ID GO:0004713
description proline-rich receptor-like protein kinase perk1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_074336_010 0.0 - - hypothetical protein OsJ_17572 [Oryza sativa Japonica Group]
2 Hb_000496_040 0.0010575498 - - conserved hypothetical protein [Ricinus communis]
3 Hb_008899_010 0.0014215934 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Nelumbo nucifera]
4 Hb_002553_150 0.001518298 - - Gram-positive signal peptide protein, YSIRK family [Streptococcus pneumoniae TCH8431/19A]
5 Hb_008052_010 0.004561297 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_006869_020 0.0070548613 - - alcohol dehydrogenase, putative [Ricinus communis]
7 Hb_002285_010 0.0078436343 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
8 Hb_000050_230 0.0078537872 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
9 Hb_000391_030 0.0078870864 - - polyprotein [Citrus endogenous pararetrovirus]
10 Hb_004332_060 0.0084107417 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_007313_020 0.0086449735 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
12 Hb_002553_090 0.0090883958 - - PREDICTED: uncharacterized protein LOC105628311 [Jatropha curcas]
13 Hb_000036_020 0.0092571373 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_002985_020 0.0092868408 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
15 Hb_006124_020 0.0097727864 - - hypothetical protein JCGZ_13738 [Jatropha curcas]
16 Hb_004032_070 0.0102183655 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
17 Hb_001568_100 0.0110567177 - - hypothetical protein Csa_2G404850 [Cucumis sativus]
18 Hb_001740_010 0.0122468342 - - hypothetical protein JCGZ_18625 [Jatropha curcas]
19 Hb_001621_080 0.0127504236 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 33 [Jatropha curcas]
20 Hb_013405_120 0.0131038274 - - -

Gene co-expression network

sample Hb_074336_010 Hb_074336_010 Hb_000496_040 Hb_000496_040 Hb_074336_010--Hb_000496_040 Hb_008899_010 Hb_008899_010 Hb_074336_010--Hb_008899_010 Hb_002553_150 Hb_002553_150 Hb_074336_010--Hb_002553_150 Hb_008052_010 Hb_008052_010 Hb_074336_010--Hb_008052_010 Hb_006869_020 Hb_006869_020 Hb_074336_010--Hb_006869_020 Hb_002285_010 Hb_002285_010 Hb_074336_010--Hb_002285_010 Hb_000496_040--Hb_002553_150 Hb_000496_040--Hb_008899_010 Hb_000496_040--Hb_008052_010 Hb_000496_040--Hb_002285_010 Hb_000050_230 Hb_000050_230 Hb_000496_040--Hb_000050_230 Hb_008899_010--Hb_002553_150 Hb_008899_010--Hb_006869_020 Hb_008899_010--Hb_008052_010 Hb_002553_090 Hb_002553_090 Hb_008899_010--Hb_002553_090 Hb_002553_150--Hb_008052_010 Hb_002553_150--Hb_002285_010 Hb_002553_150--Hb_000050_230 Hb_008052_010--Hb_002285_010 Hb_008052_010--Hb_000050_230 Hb_000391_030 Hb_000391_030 Hb_008052_010--Hb_000391_030 Hb_004332_060 Hb_004332_060 Hb_008052_010--Hb_004332_060 Hb_006869_020--Hb_002553_090 Hb_004032_070 Hb_004032_070 Hb_006869_020--Hb_004032_070 Hb_006869_020--Hb_000496_040 Hb_006869_020--Hb_002553_150 Hb_002285_010--Hb_000050_230 Hb_002285_010--Hb_000391_030 Hb_002285_010--Hb_004332_060 Hb_007313_020 Hb_007313_020 Hb_002285_010--Hb_007313_020 Hb_000036_020 Hb_000036_020 Hb_002285_010--Hb_000036_020 Hb_002985_020 Hb_002985_020 Hb_002285_010--Hb_002985_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.515708 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.42681 0

CAGE analysis