Hb_006869_020

Information

Type -
Description -
Location Contig6869: 28911-29964
Sequence    

Annotation

kegg
ID rcu:RCOM_0164610
description alcohol dehydrogenase, putative (EC:1.1.1.255)
nr
ID XP_002534367.1
description alcohol dehydrogenase, putative [Ricinus communis]
swissprot
ID Q9ZRF1
description Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1
trembl
ID B9T7Z8
description Alcohol dehydrogenase, putative OS=Ricinus communis GN=RCOM_0164610 PE=3 SV=1
Gene Ontology
ID GO:0008270
description probable mannitol dehydrogenase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006869_020 0.0 - - alcohol dehydrogenase, putative [Ricinus communis]
2 Hb_002553_090 0.0020335807 - - PREDICTED: uncharacterized protein LOC105628311 [Jatropha curcas]
3 Hb_004032_070 0.0031635851 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
4 Hb_008899_010 0.0056332879 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Nelumbo nucifera]
5 Hb_074336_010 0.0070548613 - - hypothetical protein OsJ_17572 [Oryza sativa Japonica Group]
6 Hb_000496_040 0.0081123898 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002553_150 0.0085731269 - - Gram-positive signal peptide protein, YSIRK family [Streptococcus pneumoniae TCH8431/19A]
8 Hb_008052_010 0.0116160264 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_185340_010 0.0131668233 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
10 Hb_187024_010 0.0136251235 - - -
11 Hb_002285_010 0.0148982048 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
12 Hb_000050_230 0.0149083572 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
13 Hb_000391_030 0.0149416545 - - polyprotein [Citrus endogenous pararetrovirus]
14 Hb_004332_060 0.0154652794 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_007313_020 0.0156994972 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
16 Hb_000036_020 0.0163116231 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_002985_020 0.0163413247 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
18 Hb_006124_020 0.0168272387 - - hypothetical protein JCGZ_13738 [Jatropha curcas]
19 Hb_013204_010 0.0172662296 - - hypothetical protein CICLE_v10006597mg [Citrus clementina]
20 Hb_000352_250 0.0176005256 - - -

Gene co-expression network

sample Hb_006869_020 Hb_006869_020 Hb_002553_090 Hb_002553_090 Hb_006869_020--Hb_002553_090 Hb_004032_070 Hb_004032_070 Hb_006869_020--Hb_004032_070 Hb_008899_010 Hb_008899_010 Hb_006869_020--Hb_008899_010 Hb_074336_010 Hb_074336_010 Hb_006869_020--Hb_074336_010 Hb_000496_040 Hb_000496_040 Hb_006869_020--Hb_000496_040 Hb_002553_150 Hb_002553_150 Hb_006869_020--Hb_002553_150 Hb_002553_090--Hb_004032_070 Hb_002553_090--Hb_008899_010 Hb_002553_090--Hb_074336_010 Hb_002553_090--Hb_000496_040 Hb_002553_090--Hb_002553_150 Hb_004032_070--Hb_008899_010 Hb_185340_010 Hb_185340_010 Hb_004032_070--Hb_185340_010 Hb_004032_070--Hb_074336_010 Hb_187024_010 Hb_187024_010 Hb_004032_070--Hb_187024_010 Hb_008899_010--Hb_074336_010 Hb_008899_010--Hb_000496_040 Hb_008899_010--Hb_002553_150 Hb_008052_010 Hb_008052_010 Hb_008899_010--Hb_008052_010 Hb_074336_010--Hb_000496_040 Hb_074336_010--Hb_002553_150 Hb_074336_010--Hb_008052_010 Hb_002285_010 Hb_002285_010 Hb_074336_010--Hb_002285_010 Hb_000496_040--Hb_002553_150 Hb_000496_040--Hb_008052_010 Hb_000496_040--Hb_002285_010 Hb_000050_230 Hb_000050_230 Hb_000496_040--Hb_000050_230 Hb_002553_150--Hb_008052_010 Hb_002553_150--Hb_002285_010 Hb_002553_150--Hb_000050_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.167822 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.13433 0

CAGE analysis