Hb_063869_010

Information

Type -
Description -
Location Contig63869: 50-703
Sequence    

Annotation

kegg
ID mtr:MTR_6g026690
description hypothetical protein
nr
ID BAJ53217.1
description JHL22C18.10 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUA7
description JHL22C18.10 protein OS=Jatropha curcas GN=JHL22C18.10 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_063869_010 0.0 - - JHL22C18.10 [Jatropha curcas]
2 Hb_137701_020 0.0806882042 - - putative protein kinase [Oryza sativa Japonica Group]
3 Hb_042141_010 0.0977224697 - - -
4 Hb_000205_220 0.1145218917 - - PREDICTED: uncharacterized protein LOC105647760 [Jatropha curcas]
5 Hb_052764_010 0.1206474764 - - hypothetical protein POPTR_0011s04320g [Populus trichocarpa]
6 Hb_007507_030 0.1410531531 - - polyprotein [Citrus endogenous pararetrovirus]
7 Hb_004880_120 0.1481005688 - - PREDICTED: calcium-binding protein PBP1 [Jatropha curcas]
8 Hb_101778_010 0.163536065 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
9 Hb_005183_060 0.1662305463 - - hypothetical protein JCGZ_04271 [Jatropha curcas]
10 Hb_010091_040 0.1748841843 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
11 Hb_062503_010 0.1871881665 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_007858_030 0.1925603532 - - retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa Japonica Group]
13 Hb_005772_020 0.1943216193 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
14 Hb_000230_250 0.207924981 - - PREDICTED: pyruvate, phosphate dikinase, chloroplastic [Jatropha curcas]
15 Hb_012807_070 0.209090326 - - PREDICTED: UDP-glycosyltransferase 86A2 [Jatropha curcas]
16 Hb_004176_090 0.2098945728 - - Nuc-1 negative regulatory protein preg, putative [Ricinus communis]
17 Hb_004007_210 0.2103097127 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
18 Hb_010175_050 0.2128716352 - - PREDICTED: uncharacterized protein LOC105639906 [Jatropha curcas]
19 Hb_005240_010 0.2168023707 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
20 Hb_017098_020 0.2183690306 - - Zinc finger protein GIS2 [Medicago truncatula]

Gene co-expression network

sample Hb_063869_010 Hb_063869_010 Hb_137701_020 Hb_137701_020 Hb_063869_010--Hb_137701_020 Hb_042141_010 Hb_042141_010 Hb_063869_010--Hb_042141_010 Hb_000205_220 Hb_000205_220 Hb_063869_010--Hb_000205_220 Hb_052764_010 Hb_052764_010 Hb_063869_010--Hb_052764_010 Hb_007507_030 Hb_007507_030 Hb_063869_010--Hb_007507_030 Hb_004880_120 Hb_004880_120 Hb_063869_010--Hb_004880_120 Hb_137701_020--Hb_004880_120 Hb_005183_060 Hb_005183_060 Hb_137701_020--Hb_005183_060 Hb_004176_090 Hb_004176_090 Hb_137701_020--Hb_004176_090 Hb_137701_020--Hb_042141_010 Hb_137701_020--Hb_007507_030 Hb_042141_010--Hb_007507_030 Hb_042141_010--Hb_052764_010 Hb_101778_010 Hb_101778_010 Hb_042141_010--Hb_101778_010 Hb_042141_010--Hb_000205_220 Hb_000205_220--Hb_052764_010 Hb_010091_040 Hb_010091_040 Hb_000205_220--Hb_010091_040 Hb_007858_030 Hb_007858_030 Hb_000205_220--Hb_007858_030 Hb_002284_040 Hb_002284_040 Hb_000205_220--Hb_002284_040 Hb_052764_010--Hb_010091_040 Hb_052764_010--Hb_007858_030 Hb_052764_010--Hb_002284_040 Hb_007507_030--Hb_101778_010 Hb_062503_010 Hb_062503_010 Hb_007507_030--Hb_062503_010 Hb_007507_030--Hb_005183_060 Hb_000224_250 Hb_000224_250 Hb_007507_030--Hb_000224_250 Hb_000230_250 Hb_000230_250 Hb_004880_120--Hb_000230_250 Hb_010175_050 Hb_010175_050 Hb_004880_120--Hb_010175_050 Hb_005772_020 Hb_005772_020 Hb_004880_120--Hb_005772_020 Hb_004007_210 Hb_004007_210 Hb_004880_120--Hb_004007_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.189242 0.0619879 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.137211

CAGE analysis