Hb_050786_010

Information

Type -
Description -
Location Contig50786: 67-300
Sequence    

Annotation

kegg
ID rcu:RCOM_1155070
description calcium ion binding protein, putative
nr
ID EYU31900.1
description hypothetical protein MIMGU_mgv1a014824mg [Erythranthe guttata]
swissprot
ID -
description -
trembl
ID A0A022QZD4
description Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014824mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_050786_010 0.0 - - hypothetical protein MIMGU_mgv1a014824mg [Erythranthe guttata]
2 Hb_053058_010 0.0721296752 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001597_040 0.0788511075 - - -
4 Hb_008493_020 0.0903445919 - - linamarase [Manihot esculenta]
5 Hb_060416_010 0.0926299155 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000645_040 0.094260764 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
7 Hb_001634_070 0.0958991033 - - conserved hypothetical protein [Ricinus communis]
8 Hb_009896_010 0.1028045748 - - ABC transporter G family member 15 [Morus notabilis]
9 Hb_005276_180 0.1028577054 - - hypothetical protein POPTR_0005s23040g [Populus trichocarpa]
10 Hb_001322_200 0.1040120627 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000103_210 0.1043775855 - - PREDICTED: protein lin-12-like isoform X1 [Populus euphratica]
12 Hb_000203_130 0.1050411073 - - -
13 Hb_001817_050 0.1075979216 transcription factor TF Family: C2H2 PREDICTED: transcriptional regulator SUPERMAN [Jatropha curcas]
14 Hb_002235_340 0.1084024811 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
15 Hb_103942_010 0.1085252187 - - rab5A-like protein [Trichinella spiralis]
16 Hb_003092_010 0.1103190749 - - hypothetical protein POPTR_0025s00750g [Populus trichocarpa]
17 Hb_005699_100 0.110767879 - - hypothetical protein POPTR_0013s12390g [Populus trichocarpa]
18 Hb_068804_170 0.1114191489 - - PREDICTED: probable rhamnogalacturonate lyase B [Jatropha curcas]
19 Hb_153199_010 0.1127056201 - - -
20 Hb_001688_040 0.1129002242 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_050786_010 Hb_050786_010 Hb_053058_010 Hb_053058_010 Hb_050786_010--Hb_053058_010 Hb_001597_040 Hb_001597_040 Hb_050786_010--Hb_001597_040 Hb_008493_020 Hb_008493_020 Hb_050786_010--Hb_008493_020 Hb_060416_010 Hb_060416_010 Hb_050786_010--Hb_060416_010 Hb_000645_040 Hb_000645_040 Hb_050786_010--Hb_000645_040 Hb_001634_070 Hb_001634_070 Hb_050786_010--Hb_001634_070 Hb_053058_010--Hb_008493_020 Hb_009896_010 Hb_009896_010 Hb_053058_010--Hb_009896_010 Hb_053058_010--Hb_001634_070 Hb_053058_010--Hb_001597_040 Hb_053058_010--Hb_060416_010 Hb_001597_040--Hb_001634_070 Hb_001597_040--Hb_009896_010 Hb_001597_040--Hb_008493_020 Hb_002186_190 Hb_002186_190 Hb_001597_040--Hb_002186_190 Hb_008493_020--Hb_060416_010 Hb_008493_020--Hb_009896_010 Hb_008493_020--Hb_001634_070 Hb_103942_010 Hb_103942_010 Hb_008493_020--Hb_103942_010 Hb_001322_200 Hb_001322_200 Hb_008493_020--Hb_001322_200 Hb_000002_190 Hb_000002_190 Hb_060416_010--Hb_000002_190 Hb_000003_520 Hb_000003_520 Hb_060416_010--Hb_000003_520 Hb_000005_170 Hb_000005_170 Hb_060416_010--Hb_000005_170 Hb_000009_230 Hb_000009_230 Hb_060416_010--Hb_000009_230 Hb_000011_110 Hb_000011_110 Hb_060416_010--Hb_000011_110 Hb_000224_070 Hb_000224_070 Hb_000645_040--Hb_000224_070 Hb_000027_020 Hb_000027_020 Hb_000645_040--Hb_000027_020 Hb_001817_050 Hb_001817_050 Hb_000645_040--Hb_001817_050 Hb_002235_340 Hb_002235_340 Hb_000645_040--Hb_002235_340 Hb_118941_010 Hb_118941_010 Hb_000645_040--Hb_118941_010 Hb_000203_130 Hb_000203_130 Hb_000645_040--Hb_000203_130 Hb_001634_070--Hb_060416_010 Hb_001634_070--Hb_009896_010 Hb_001634_070--Hb_000027_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.852536 140.813 0.737399 0.39063
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.17082 0.801548

CAGE analysis