Hb_011362_020

Information

Type -
Description -
Location Contig11362: 13994-16369
Sequence    

Annotation

kegg
ID rcu:RCOM_1045360
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.26)
nr
ID XP_002523485.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID P17801
description Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2
trembl
ID B9SBW6
description Serine/threonine-protein kinase OS=Ricinus communis GN=RCOM_1045360 PE=3 SV=1
Gene Ontology
ID GO:0004674
description receptor protein kinase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011362_020 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_032443_030 0.094871936 - - PREDICTED: protein SRG1-like [Jatropha curcas]
3 Hb_002986_110 0.0952716321 - - PREDICTED: patatin-like protein 1 [Jatropha curcas]
4 Hb_013654_010 0.0981413048 - - unnamed protein product [Vitis vinifera]
5 Hb_032920_080 0.1009866715 - - PREDICTED: uncharacterized protein LOC104602705 [Nelumbo nucifera]
6 Hb_001814_090 0.101097747 - - PREDICTED: uncharacterized protein LOC105636644 [Jatropha curcas]
7 Hb_060245_010 0.1011246188 - - -
8 Hb_001476_010 0.1012203729 - - hypothetical protein JCGZ_15669 [Jatropha curcas]
9 Hb_012120_010 0.1012602077 - - -
10 Hb_140406_010 0.1012792331 - - hypothetical protein JCGZ_19461 [Jatropha curcas]
11 Hb_051719_020 0.1013600114 - - PREDICTED: toll/interleukin-1 receptor-like protein [Jatropha curcas]
12 Hb_027556_030 0.1014558254 - - PREDICTED: pleiotropic drug resistance protein 1-like, partial [Gossypium raimondii]
13 Hb_001611_030 0.1015128104 - - -
14 Hb_002400_120 0.1015458463 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
15 Hb_003894_130 0.1016177948 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
16 Hb_013405_120 0.1016658911 - - -
17 Hb_001621_080 0.1017095058 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 33 [Jatropha curcas]
18 Hb_001740_010 0.1017737214 - - hypothetical protein JCGZ_18625 [Jatropha curcas]
19 Hb_001568_100 0.1019351033 - - hypothetical protein Csa_2G404850 [Cucumis sativus]
20 Hb_006124_020 0.1021243107 - - hypothetical protein JCGZ_13738 [Jatropha curcas]

Gene co-expression network

sample Hb_011362_020 Hb_011362_020 Hb_032443_030 Hb_032443_030 Hb_011362_020--Hb_032443_030 Hb_002986_110 Hb_002986_110 Hb_011362_020--Hb_002986_110 Hb_013654_010 Hb_013654_010 Hb_011362_020--Hb_013654_010 Hb_032920_080 Hb_032920_080 Hb_011362_020--Hb_032920_080 Hb_001814_090 Hb_001814_090 Hb_011362_020--Hb_001814_090 Hb_060245_010 Hb_060245_010 Hb_011362_020--Hb_060245_010 Hb_032443_030--Hb_002986_110 Hb_008052_010 Hb_008052_010 Hb_032443_030--Hb_008052_010 Hb_002285_010 Hb_002285_010 Hb_032443_030--Hb_002285_010 Hb_000050_230 Hb_000050_230 Hb_032443_030--Hb_000050_230 Hb_000391_030 Hb_000391_030 Hb_032443_030--Hb_000391_030 Hb_004332_060 Hb_004332_060 Hb_032443_030--Hb_004332_060 Hb_002986_110--Hb_013654_010 Hb_002005_010 Hb_002005_010 Hb_002986_110--Hb_002005_010 Hb_008214_010 Hb_008214_010 Hb_002986_110--Hb_008214_010 Hb_008052_020 Hb_008052_020 Hb_002986_110--Hb_008052_020 Hb_032215_070 Hb_032215_070 Hb_002986_110--Hb_032215_070 Hb_013654_010--Hb_008214_010 Hb_013654_010--Hb_008052_020 Hb_013654_010--Hb_002005_010 Hb_013654_010--Hb_032215_070 Hb_001427_130 Hb_001427_130 Hb_013654_010--Hb_001427_130 Hb_032920_080--Hb_001814_090 Hb_032920_080--Hb_060245_010 Hb_001476_010 Hb_001476_010 Hb_032920_080--Hb_001476_010 Hb_012120_010 Hb_012120_010 Hb_032920_080--Hb_012120_010 Hb_140406_010 Hb_140406_010 Hb_032920_080--Hb_140406_010 Hb_051719_020 Hb_051719_020 Hb_032920_080--Hb_051719_020 Hb_001814_090--Hb_060245_010 Hb_001814_090--Hb_001476_010 Hb_001814_090--Hb_012120_010 Hb_001814_090--Hb_140406_010 Hb_001814_090--Hb_051719_020 Hb_060245_010--Hb_001476_010 Hb_060245_010--Hb_012120_010 Hb_060245_010--Hb_140406_010 Hb_060245_010--Hb_051719_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.76257 0.00642185 0.0235732 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0186739 0.0734702 0.0279819 3.51404 0

CAGE analysis