Hb_003847_010

Information

Type -
Description -
Location Contig3847: 1717-2600
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003847_010 0.0 - - -
2 Hb_000174_280 0.0405137525 - - -
3 Hb_001226_080 0.1704449019 - - heat-shock protein, putative [Ricinus communis]
4 Hb_002240_100 0.1851431852 - - -
5 Hb_012340_040 0.2131615076 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase-like [Populus euphratica]
6 Hb_004829_020 0.2193997062 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_152439_010 0.2326072914 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
8 Hb_001524_100 0.2531258506 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
9 Hb_062858_010 0.2567830992 - - heat-shock protein, putative [Ricinus communis]
10 Hb_002188_020 0.2880145344 - - unnamed protein product [Vitis vinifera]
11 Hb_178613_010 0.2988282981 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
12 Hb_004282_030 0.3023632308 - - hypothetical protein EUGRSUZ_B01857 [Eucalyptus grandis]
13 Hb_136856_010 0.309540136 - - PREDICTED: uncharacterized protein LOC105436302 [Cucumis sativus]
14 Hb_089491_010 0.3097403586 - - -
15 Hb_009268_110 0.309865407 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
16 Hb_021068_020 0.3109519134 - - -
17 Hb_009066_010 0.3137425259 - - -
18 Hb_068347_020 0.3146089611 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
19 Hb_027394_010 0.3146127316 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
20 Hb_111834_010 0.3150408621 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]

Gene co-expression network

sample Hb_003847_010 Hb_003847_010 Hb_000174_280 Hb_000174_280 Hb_003847_010--Hb_000174_280 Hb_001226_080 Hb_001226_080 Hb_003847_010--Hb_001226_080 Hb_002240_100 Hb_002240_100 Hb_003847_010--Hb_002240_100 Hb_012340_040 Hb_012340_040 Hb_003847_010--Hb_012340_040 Hb_004829_020 Hb_004829_020 Hb_003847_010--Hb_004829_020 Hb_152439_010 Hb_152439_010 Hb_003847_010--Hb_152439_010 Hb_000174_280--Hb_012340_040 Hb_000174_280--Hb_004829_020 Hb_000174_280--Hb_001226_080 Hb_062858_010 Hb_062858_010 Hb_000174_280--Hb_062858_010 Hb_000174_280--Hb_002240_100 Hb_001226_080--Hb_002240_100 Hb_013205_010 Hb_013205_010 Hb_001226_080--Hb_013205_010 Hb_027394_010 Hb_027394_010 Hb_001226_080--Hb_027394_010 Hb_068347_020 Hb_068347_020 Hb_001226_080--Hb_068347_020 Hb_009066_010 Hb_009066_010 Hb_001226_080--Hb_009066_010 Hb_001524_100 Hb_001524_100 Hb_002240_100--Hb_001524_100 Hb_002240_100--Hb_152439_010 Hb_178613_010 Hb_178613_010 Hb_002240_100--Hb_178613_010 Hb_012340_040--Hb_004829_020 Hb_000795_010 Hb_000795_010 Hb_012340_040--Hb_000795_010 Hb_004282_030 Hb_004282_030 Hb_012340_040--Hb_004282_030 Hb_007761_010 Hb_007761_010 Hb_012340_040--Hb_007761_010 Hb_128173_010 Hb_128173_010 Hb_012340_040--Hb_128173_010 Hb_004829_020--Hb_000795_010 Hb_004829_020--Hb_004282_030 Hb_004829_020--Hb_007761_010 Hb_004829_020--Hb_128173_010 Hb_000364_110 Hb_000364_110 Hb_152439_010--Hb_000364_110 Hb_152439_010--Hb_000174_280 Hb_152439_010--Hb_001226_080 Hb_152439_010--Hb_001524_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.568991 1.362
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.41934 0

CAGE analysis