Hb_013205_010

Information

Type -
Description -
Location Contig13205: 11679-12752
Sequence    

Annotation

kegg
ID tcc:TCM_015393
description hypothetical protein
nr
ID XP_012089483.1
description PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JUU4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23573 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013205_010 0.0 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
2 Hb_010399_020 0.0323904315 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
3 Hb_008151_030 0.0362932641 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
4 Hb_034667_010 0.0427921102 - - -
5 Hb_000260_190 0.0469489343 - - -
6 Hb_002400_450 0.0493894272 - - PREDICTED: protein MEMO1 isoform X2 [Sesamum indicum]
7 Hb_003400_030 0.0541121744 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
8 Hb_000944_010 0.0542103591 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
9 Hb_008473_010 0.064876467 - - PREDICTED: laccase-14-like [Jatropha curcas]
10 Hb_091369_010 0.0658582453 - - -
11 Hb_002673_050 0.0678858464 - - -
12 Hb_027394_010 0.077118258 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
13 Hb_068347_020 0.0771395159 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
14 Hb_009066_010 0.082225706 - - -
15 Hb_021068_020 0.1030206191 - - -
16 Hb_108404_010 0.1162217472 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
17 Hb_136856_010 0.1209215325 - - PREDICTED: uncharacterized protein LOC105436302 [Cucumis sativus]
18 Hb_128287_010 0.1348791238 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
19 Hb_089491_010 0.1601325514 - - -
20 Hb_009268_110 0.1620213084 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]

Gene co-expression network

sample Hb_013205_010 Hb_013205_010 Hb_010399_020 Hb_010399_020 Hb_013205_010--Hb_010399_020 Hb_008151_030 Hb_008151_030 Hb_013205_010--Hb_008151_030 Hb_034667_010 Hb_034667_010 Hb_013205_010--Hb_034667_010 Hb_000260_190 Hb_000260_190 Hb_013205_010--Hb_000260_190 Hb_002400_450 Hb_002400_450 Hb_013205_010--Hb_002400_450 Hb_003400_030 Hb_003400_030 Hb_013205_010--Hb_003400_030 Hb_010399_020--Hb_008151_030 Hb_010399_020--Hb_034667_010 Hb_010399_020--Hb_000260_190 Hb_010399_020--Hb_002400_450 Hb_010399_020--Hb_003400_030 Hb_000944_010 Hb_000944_010 Hb_010399_020--Hb_000944_010 Hb_008151_030--Hb_034667_010 Hb_008151_030--Hb_000260_190 Hb_008151_030--Hb_002400_450 Hb_008151_030--Hb_003400_030 Hb_008151_030--Hb_000944_010 Hb_034667_010--Hb_000260_190 Hb_034667_010--Hb_002400_450 Hb_034667_010--Hb_003400_030 Hb_034667_010--Hb_000944_010 Hb_000260_190--Hb_002400_450 Hb_000260_190--Hb_003400_030 Hb_000260_190--Hb_000944_010 Hb_002400_450--Hb_003400_030 Hb_002400_450--Hb_000944_010 Hb_008473_010 Hb_008473_010 Hb_002400_450--Hb_008473_010 Hb_003400_030--Hb_000944_010 Hb_003400_030--Hb_008473_010 Hb_091369_010 Hb_091369_010 Hb_003400_030--Hb_091369_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0227866 0.027586
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis