Hb_002081_100

Information

Type -
Description -
Location Contig2081: 201031-203121
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002081_100 0.0 - - -
2 Hb_000340_480 0.1130560724 - - -
3 Hb_004375_060 0.114675205 - - PREDICTED: myelin transcription factor 1-like isoform X1 [Jatropha curcas]
4 Hb_064201_010 0.1521024666 - - hypothetical protein RCOM_1685970 [Ricinus communis]
5 Hb_000329_620 0.1574087697 - - PREDICTED: uncharacterized protein LOC105643215 [Jatropha curcas]
6 Hb_178345_010 0.1616254098 - - hypothetical protein PHAVU_004G084200g [Phaseolus vulgaris]
7 Hb_000061_410 0.1623441041 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
8 Hb_002627_060 0.165176119 transcription factor TF Family: MYB Duplicated homeodomain-like superfamily protein, putative [Theobroma cacao]
9 Hb_013479_020 0.1655819702 - - PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B [Jatropha curcas]
10 Hb_001846_080 0.166314709 - - PREDICTED: poly(rC)-binding protein 3-like [Nicotiana sylvestris]
11 Hb_001635_220 0.1671647848 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH87 [Jatropha curcas]
12 Hb_009193_130 0.1680342425 - - hypothetical protein RCOM_1620550 [Ricinus communis]
13 Hb_004657_010 0.1703584112 - - PREDICTED: uncharacterized protein LOC105639764 [Jatropha curcas]
14 Hb_000612_070 0.1714719917 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000914_060 0.1726038664 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor PLT1 [Populus euphratica]
16 Hb_029464_010 0.1731294657 - - PREDICTED: zeatin O-glucosyltransferase-like [Jatropha curcas]
17 Hb_000856_100 0.1731659695 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 [Jatropha curcas]
18 Hb_004449_010 0.1733120127 - - lipase [Ricinus communis]
19 Hb_001252_160 0.1756264079 - - PREDICTED: PRA1 family protein A3 [Jatropha curcas]
20 Hb_001504_170 0.1771852763 - - plant poly(A)+ RNA export protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_002081_100 Hb_002081_100 Hb_000340_480 Hb_000340_480 Hb_002081_100--Hb_000340_480 Hb_004375_060 Hb_004375_060 Hb_002081_100--Hb_004375_060 Hb_064201_010 Hb_064201_010 Hb_002081_100--Hb_064201_010 Hb_000329_620 Hb_000329_620 Hb_002081_100--Hb_000329_620 Hb_178345_010 Hb_178345_010 Hb_002081_100--Hb_178345_010 Hb_000061_410 Hb_000061_410 Hb_002081_100--Hb_000061_410 Hb_000340_480--Hb_004375_060 Hb_000612_070 Hb_000612_070 Hb_000340_480--Hb_000612_070 Hb_005496_060 Hb_005496_060 Hb_000340_480--Hb_005496_060 Hb_004449_010 Hb_004449_010 Hb_000340_480--Hb_004449_010 Hb_002835_190 Hb_002835_190 Hb_000340_480--Hb_002835_190 Hb_004375_060--Hb_178345_010 Hb_001504_170 Hb_001504_170 Hb_004375_060--Hb_001504_170 Hb_013479_020 Hb_013479_020 Hb_004375_060--Hb_013479_020 Hb_004025_030 Hb_004025_030 Hb_004375_060--Hb_004025_030 Hb_001146_070 Hb_001146_070 Hb_064201_010--Hb_001146_070 Hb_005271_030 Hb_005271_030 Hb_064201_010--Hb_005271_030 Hb_064201_010--Hb_000329_620 Hb_003376_170 Hb_003376_170 Hb_064201_010--Hb_003376_170 Hb_000352_130 Hb_000352_130 Hb_064201_010--Hb_000352_130 Hb_064201_010--Hb_000061_410 Hb_007158_030 Hb_007158_030 Hb_000329_620--Hb_007158_030 Hb_029464_010 Hb_029464_010 Hb_000329_620--Hb_029464_010 Hb_009193_130 Hb_009193_130 Hb_000329_620--Hb_009193_130 Hb_000329_620--Hb_002835_190 Hb_000329_620--Hb_005271_030 Hb_001252_160 Hb_001252_160 Hb_000329_620--Hb_001252_160 Hb_002851_060 Hb_002851_060 Hb_178345_010--Hb_002851_060 Hb_044662_040 Hb_044662_040 Hb_178345_010--Hb_044662_040 Hb_000977_140 Hb_000977_140 Hb_178345_010--Hb_000977_140 Hb_012395_100 Hb_012395_100 Hb_178345_010--Hb_012395_100 Hb_000175_520 Hb_000175_520 Hb_178345_010--Hb_000175_520 Hb_000061_410--Hb_001252_160 Hb_000155_070 Hb_000155_070 Hb_000061_410--Hb_000155_070 Hb_003627_020 Hb_003627_020 Hb_000061_410--Hb_003627_020 Hb_003507_020 Hb_003507_020 Hb_000061_410--Hb_003507_020 Hb_000061_410--Hb_029464_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.47437 0 0.304235 0 6.40655 8.76907
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.27619 2.34209 0.69756 0.530408 0

CAGE analysis