Hb_001863_390

Information

Type -
Description -
Location Contig1863: 335932-339332
Sequence    

Annotation

kegg
ID rcu:RCOM_1035680
description abhydrolase domain containing, putative
nr
ID XP_012067878.1
description PREDICTED: monoacylglycerol lipase ABHD6 [Jatropha curcas]
swissprot
ID Q8R2Y0
description Monoacylglycerol lipase ABHD6 OS=Mus musculus GN=Abhd6 PE=1 SV=1
trembl
ID A0A067KYV9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15793 PE=4 SV=1
Gene Ontology
ID GO:0016787
description monoacylglycerol lipase abhd6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18368: 336064-336959
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001863_390 0.0 - - PREDICTED: monoacylglycerol lipase ABHD6 [Jatropha curcas]
2 Hb_003018_200 0.0612344751 - - inositol or phosphatidylinositol kinase, putative [Ricinus communis]
3 Hb_016065_010 0.0720443946 - - PREDICTED: pentatricopeptide repeat-containing protein At5g08305 [Jatropha curcas]
4 Hb_055062_030 0.0749456433 - - PREDICTED: mediator of RNA polymerase II transcription subunit 10b-like isoform X1 [Jatropha curcas]
5 Hb_009486_130 0.0877837698 - - hypothetical protein CISIN_1g023046mg [Citrus sinensis]
6 Hb_163145_020 0.0895311003 - - PREDICTED: protein phosphatase 2C 29 [Jatropha curcas]
7 Hb_008453_090 0.0901108343 - - hypothetical protein JCGZ_08177 [Jatropha curcas]
8 Hb_000115_330 0.090655384 - - altered response to gravity (arg1), plant, putative [Ricinus communis]
9 Hb_000009_160 0.0931537513 - - RUB1 conjugating enzyme 1 isoform 2 [Theobroma cacao]
10 Hb_018790_060 0.0940099218 - - hypothetical protein JCGZ_21628 [Jatropha curcas]
11 Hb_005488_010 0.0944123754 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000200_340 0.0957634693 - - PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Jatropha curcas]
13 Hb_004951_040 0.0961227541 - - PREDICTED: pentatricopeptide repeat-containing protein At1g31790-like [Jatropha curcas]
14 Hb_001671_020 0.0970967864 - - PREDICTED: pentatricopeptide repeat-containing protein At5g08510 [Jatropha curcas]
15 Hb_001277_330 0.0971245867 - - PREDICTED: transmembrane emp24 domain-containing protein p24beta3 [Jatropha curcas]
16 Hb_004324_370 0.0977742023 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g49142 [Jatropha curcas]
17 Hb_189003_080 0.0978377942 - - PREDICTED: rab3 GTPase-activating protein non-catalytic subunit isoform X1 [Jatropha curcas]
18 Hb_000567_260 0.0984478833 - - BnaA09g41440D [Brassica napus]
19 Hb_000457_150 0.0996970968 - - PREDICTED: transcription factor GTE8-like [Jatropha curcas]
20 Hb_004993_050 0.0997009846 - - -

Gene co-expression network

sample Hb_001863_390 Hb_001863_390 Hb_003018_200 Hb_003018_200 Hb_001863_390--Hb_003018_200 Hb_016065_010 Hb_016065_010 Hb_001863_390--Hb_016065_010 Hb_055062_030 Hb_055062_030 Hb_001863_390--Hb_055062_030 Hb_009486_130 Hb_009486_130 Hb_001863_390--Hb_009486_130 Hb_163145_020 Hb_163145_020 Hb_001863_390--Hb_163145_020 Hb_008453_090 Hb_008453_090 Hb_001863_390--Hb_008453_090 Hb_002603_100 Hb_002603_100 Hb_003018_200--Hb_002603_100 Hb_003018_200--Hb_008453_090 Hb_007101_150 Hb_007101_150 Hb_003018_200--Hb_007101_150 Hb_000056_340 Hb_000056_340 Hb_003018_200--Hb_000056_340 Hb_007101_130 Hb_007101_130 Hb_003018_200--Hb_007101_130 Hb_000205_270 Hb_000205_270 Hb_016065_010--Hb_000205_270 Hb_005488_010 Hb_005488_010 Hb_016065_010--Hb_005488_010 Hb_016065_010--Hb_008453_090 Hb_016065_010--Hb_055062_030 Hb_016065_010--Hb_009486_130 Hb_000009_160 Hb_000009_160 Hb_016065_010--Hb_000009_160 Hb_055062_030--Hb_005488_010 Hb_001671_020 Hb_001671_020 Hb_055062_030--Hb_001671_020 Hb_008289_060 Hb_008289_060 Hb_055062_030--Hb_008289_060 Hb_000567_260 Hb_000567_260 Hb_055062_030--Hb_000567_260 Hb_055062_030--Hb_008453_090 Hb_000115_330 Hb_000115_330 Hb_009486_130--Hb_000115_330 Hb_000431_010 Hb_000431_010 Hb_009486_130--Hb_000431_010 Hb_008300_010 Hb_008300_010 Hb_009486_130--Hb_008300_010 Hb_009486_130--Hb_000205_270 Hb_009486_130--Hb_005488_010 Hb_001329_300 Hb_001329_300 Hb_163145_020--Hb_001329_300 Hb_163145_020--Hb_000567_260 Hb_000635_220 Hb_000635_220 Hb_163145_020--Hb_000635_220 Hb_002006_090 Hb_002006_090 Hb_163145_020--Hb_002006_090 Hb_000457_150 Hb_000457_150 Hb_163145_020--Hb_000457_150 Hb_000614_230 Hb_000614_230 Hb_163145_020--Hb_000614_230 Hb_004951_040 Hb_004951_040 Hb_008453_090--Hb_004951_040 Hb_000193_290 Hb_000193_290 Hb_008453_090--Hb_000193_290 Hb_005333_130 Hb_005333_130 Hb_008453_090--Hb_005333_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.73688 2.51874 1.20175 1.23616 5.74657 4.04829
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.57232 7.22496 7.09361 2.41158 1.86128

CAGE analysis