Hb_001448_020

Information

Type -
Description -
Location Contig1448: 31703-34617
Sequence    

Annotation

kegg
ID pop:POPTR_0019s09920g
description POPTRDRAFT_914296; hypothetical protein
nr
ID KDP45597.1
description hypothetical protein JCGZ_17204 [Jatropha curcas]
swissprot
ID Q93ZR6
description O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=WSD1 PE=2 SV=1
trembl
ID A0A067LB14
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17204 PE=4 SV=1
Gene Ontology
ID GO:0016746
description o-acyltransferase wsd1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001448_020 0.0 - - hypothetical protein JCGZ_17204 [Jatropha curcas]
2 Hb_113945_010 0.1768140002 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
3 Hb_000934_180 0.1928027189 - - hypothetical protein JCGZ_25237 [Jatropha curcas]
4 Hb_039096_010 0.1989246897 - - unknown [Populus trichocarpa]
5 Hb_000011_380 0.2051372155 - - PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease SBT1.6 [Jatropha curcas]
6 Hb_000106_060 0.2125646115 - - PREDICTED: uncharacterized protein LOC105636580 [Jatropha curcas]
7 Hb_170861_010 0.2157595003 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
8 Hb_002876_190 0.2218417747 transcription factor TF Family: GRAS hypothetical protein PRUPE_ppa017519mg [Prunus persica]
9 Hb_007161_020 0.22902029 - - PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Jatropha curcas]
10 Hb_001663_120 0.2296013504 - - PREDICTED: formin-like protein 1 isoform X1 [Jatropha curcas]
11 Hb_120357_010 0.2308093001 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
12 Hb_000011_320 0.233363447 - - PREDICTED: uncharacterized protein LOC105631328 [Jatropha curcas]
13 Hb_001775_130 0.234330776 - - Prephenate dehydratase [Hevea brasiliensis]
14 Hb_080068_010 0.2345106234 - - PREDICTED: basic 7S globulin-like [Jatropha curcas]
15 Hb_049438_020 0.2379003356 - - PREDICTED: peroxidase 20 [Jatropha curcas]
16 Hb_159809_080 0.2402968297 - - multidrug resistance pump, putative [Ricinus communis]
17 Hb_004462_040 0.2412771917 - - unnamed protein product [Vitis vinifera]
18 Hb_001148_050 0.2440854245 - - -
19 Hb_106099_010 0.2455494789 - - -
20 Hb_003212_020 0.2458651199 - - hypothetical protein PHAVU_009G114800g [Phaseolus vulgaris]

Gene co-expression network

sample Hb_001448_020 Hb_001448_020 Hb_113945_010 Hb_113945_010 Hb_001448_020--Hb_113945_010 Hb_000934_180 Hb_000934_180 Hb_001448_020--Hb_000934_180 Hb_039096_010 Hb_039096_010 Hb_001448_020--Hb_039096_010 Hb_000011_380 Hb_000011_380 Hb_001448_020--Hb_000011_380 Hb_000106_060 Hb_000106_060 Hb_001448_020--Hb_000106_060 Hb_170861_010 Hb_170861_010 Hb_001448_020--Hb_170861_010 Hb_113945_010--Hb_170861_010 Hb_113945_010--Hb_000106_060 Hb_113945_010--Hb_039096_010 Hb_113945_010--Hb_000934_180 Hb_007161_020 Hb_007161_020 Hb_113945_010--Hb_007161_020 Hb_002876_190 Hb_002876_190 Hb_113945_010--Hb_002876_190 Hb_000934_180--Hb_170861_010 Hb_000934_180--Hb_039096_010 Hb_000934_180--Hb_000106_060 Hb_120357_010 Hb_120357_010 Hb_000934_180--Hb_120357_010 Hb_000934_180--Hb_002876_190 Hb_039096_010--Hb_002876_190 Hb_001775_130 Hb_001775_130 Hb_039096_010--Hb_001775_130 Hb_039096_010--Hb_000106_060 Hb_039096_010--Hb_170861_010 Hb_000011_380--Hb_007161_020 Hb_000011_380--Hb_039096_010 Hb_000011_380--Hb_113945_010 Hb_000749_160 Hb_000749_160 Hb_000011_380--Hb_000749_160 Hb_000429_030 Hb_000429_030 Hb_000011_380--Hb_000429_030 Hb_000011_380--Hb_000106_060 Hb_000106_060--Hb_170861_010 Hb_000106_060--Hb_002876_190 Hb_000106_060--Hb_001775_130 Hb_170861_010--Hb_120357_010 Hb_170861_010--Hb_002876_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0148874 0.0141317 0.341587 0.0515511 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.206426 0.0666159

CAGE analysis