Hb_001246_010

Information

Type -
Description -
Location Contig1246: 942-3343
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001246_010 0.0 - - -
2 Hb_005843_030 0.1459179869 - - PREDICTED: eukaryotic initiation factor 4A [Jatropha curcas]
3 Hb_000034_140 0.1740642819 - - PREDICTED: mechanosensitive ion channel protein 2, chloroplastic-like isoform X3 [Jatropha curcas]
4 Hb_005784_080 0.1966685728 - - kinase, putative [Ricinus communis]
5 Hb_009421_100 0.1979393858 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os01g0234100-like [Jatropha curcas]
6 Hb_002831_040 0.2043644298 - - PREDICTED: fatty acid amide hydrolase-like [Jatropha curcas]
7 Hb_000329_390 0.2043916465 transcription factor TF Family: C2H2 conserved hypothetical protein [Ricinus communis]
8 Hb_000883_130 0.2091309816 - - PREDICTED: novel plant SNARE 11 [Jatropha curcas]
9 Hb_002960_120 0.2140251807 - - PREDICTED: uncharacterized protein LOC105635318 [Jatropha curcas]
10 Hb_000018_170 0.2190675198 - - PREDICTED: bark storage protein A-like [Jatropha curcas]
11 Hb_000347_080 0.2193019103 - - PREDICTED: 25.3 kDa vesicle transport protein [Jatropha curcas]
12 Hb_134310_010 0.2195316851 - - PREDICTED: ATP-dependent DNA helicase MER3 homolog [Jatropha curcas]
13 Hb_002377_040 0.2210370462 - - serine/threonine protein kinase, putative [Ricinus communis]
14 Hb_000300_540 0.2212094489 - - PREDICTED: syntaxin-132 [Jatropha curcas]
15 Hb_001279_330 0.2217797196 - - Protein bem46, putative [Ricinus communis]
16 Hb_000297_110 0.2227437837 - - PREDICTED: uncharacterized protein LOC105634718 [Jatropha curcas]
17 Hb_000243_320 0.2231607956 - - conserved hypothetical protein [Ricinus communis]
18 Hb_007786_010 0.2238755258 - - PREDICTED: uncharacterized protein LOC100801920 [Glycine max]
19 Hb_000789_100 0.224295551 - - PREDICTED: glucan endo-1,3-beta-glucosidase 13-like [Jatropha curcas]
20 Hb_141939_010 0.2247640305 - - PREDICTED: mechanosensitive ion channel protein 3, chloroplastic-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001246_010 Hb_001246_010 Hb_005843_030 Hb_005843_030 Hb_001246_010--Hb_005843_030 Hb_000034_140 Hb_000034_140 Hb_001246_010--Hb_000034_140 Hb_005784_080 Hb_005784_080 Hb_001246_010--Hb_005784_080 Hb_009421_100 Hb_009421_100 Hb_001246_010--Hb_009421_100 Hb_002831_040 Hb_002831_040 Hb_001246_010--Hb_002831_040 Hb_000329_390 Hb_000329_390 Hb_001246_010--Hb_000329_390 Hb_005843_030--Hb_005784_080 Hb_000997_020 Hb_000997_020 Hb_005843_030--Hb_000997_020 Hb_002997_170 Hb_002997_170 Hb_005843_030--Hb_002997_170 Hb_004108_020 Hb_004108_020 Hb_005843_030--Hb_004108_020 Hb_000172_120 Hb_000172_120 Hb_005843_030--Hb_000172_120 Hb_000836_630 Hb_000836_630 Hb_000034_140--Hb_000836_630 Hb_141939_010 Hb_141939_010 Hb_000034_140--Hb_141939_010 Hb_000761_020 Hb_000761_020 Hb_000034_140--Hb_000761_020 Hb_031042_040 Hb_031042_040 Hb_000034_140--Hb_031042_040 Hb_000001_020 Hb_000001_020 Hb_000034_140--Hb_000001_020 Hb_000034_140--Hb_000329_390 Hb_001341_050 Hb_001341_050 Hb_005784_080--Hb_001341_050 Hb_000176_110 Hb_000176_110 Hb_005784_080--Hb_000176_110 Hb_003352_050 Hb_003352_050 Hb_005784_080--Hb_003352_050 Hb_033642_020 Hb_033642_020 Hb_005784_080--Hb_033642_020 Hb_005784_080--Hb_000997_020 Hb_005784_080--Hb_000172_120 Hb_007786_010 Hb_007786_010 Hb_009421_100--Hb_007786_010 Hb_002025_140 Hb_002025_140 Hb_009421_100--Hb_002025_140 Hb_000684_180 Hb_000684_180 Hb_009421_100--Hb_000684_180 Hb_003384_030 Hb_003384_030 Hb_009421_100--Hb_003384_030 Hb_000573_040 Hb_000573_040 Hb_009421_100--Hb_000573_040 Hb_000462_150 Hb_000462_150 Hb_009421_100--Hb_000462_150 Hb_152453_010 Hb_152453_010 Hb_002831_040--Hb_152453_010 Hb_001266_140 Hb_001266_140 Hb_002831_040--Hb_001266_140 Hb_000976_080 Hb_000976_080 Hb_002831_040--Hb_000976_080 Hb_000189_510 Hb_000189_510 Hb_002831_040--Hb_000189_510 Hb_005085_020 Hb_005085_020 Hb_002831_040--Hb_005085_020 Hb_005846_020 Hb_005846_020 Hb_002831_040--Hb_005846_020 Hb_014361_100 Hb_014361_100 Hb_000329_390--Hb_014361_100 Hb_022256_040 Hb_022256_040 Hb_000329_390--Hb_022256_040 Hb_001348_050 Hb_001348_050 Hb_000329_390--Hb_001348_050 Hb_000345_530 Hb_000345_530 Hb_000329_390--Hb_000345_530 Hb_011282_030 Hb_011282_030 Hb_000329_390--Hb_011282_030 Hb_002997_100 Hb_002997_100 Hb_000329_390--Hb_002997_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.13798 0 0.731214 0.276233 1.1632 1.23225
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.526063 0.206723 0.63044 0.18353 0

CAGE analysis