Hb_001019_080

Information

Type -
Description -
Location Contig1019: 110051-110440
Sequence    

Annotation

kegg
ID rcu:RCOM_0220240
description hypothetical protein
nr
ID KDP32355.1
description hypothetical protein JCGZ_13280 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KJB9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13280 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001019_080 0.0 - - hypothetical protein JCGZ_13280 [Jatropha curcas]
2 Hb_001814_070 0.1016827545 - - PREDICTED: uncharacterized protein LOC105650638 [Jatropha curcas]
3 Hb_002289_120 0.1053470765 - - PREDICTED: uncharacterized protein LOC105645218 isoform X2 [Jatropha curcas]
4 Hb_000010_210 0.1088407995 - - PREDICTED: centromere protein X [Jatropha curcas]
5 Hb_000840_190 0.110193718 - - 60S ribosomal protein L10, mitochondrial, putative [Ricinus communis]
6 Hb_007432_080 0.110911537 - - PREDICTED: mannose-6-phosphate isomerase 1-like [Jatropha curcas]
7 Hb_007875_030 0.1111484352 - - PREDICTED: tubulin-folding cofactor B-like [Jatropha curcas]
8 Hb_001279_310 0.11365134 - - hypothetical protein JCGZ_10212 [Jatropha curcas]
9 Hb_004162_210 0.1159208959 - - Cyclin-dependent kinases regulatory subunit, putative [Ricinus communis]
10 Hb_000000_170 0.1164034576 - - defender against cell death, putative [Ricinus communis]
11 Hb_004297_070 0.1165576241 - - hypothetical protein POPTR_0009s14820g [Populus trichocarpa]
12 Hb_002900_160 0.1181188724 - - PREDICTED: immediate early response 3-interacting protein 1-like [Jatropha curcas]
13 Hb_008695_040 0.1191061261 - - PREDICTED: small ribosomal subunit protein S13, mitochondrial-like [Jatropha curcas]
14 Hb_128048_010 0.1215505129 - - small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus communis]
15 Hb_003607_170 0.1219969065 - - U6 snRNA-associated Sm-like protein LSm5 [Hevea brasiliensis]
16 Hb_003878_010 0.1228451313 - - PREDICTED: uncharacterized protein LOC105632145 [Jatropha curcas]
17 Hb_000617_090 0.1241435471 - - hypoia-responsive family protein 4 [Hevea brasiliensis]
18 Hb_000484_020 0.1248383948 - - hypothetical protein CISIN_1g030884mg [Citrus sinensis]
19 Hb_000152_420 0.1257812216 - - hypothetical protein B456_001G174200, partial [Gossypium raimondii]
20 Hb_000505_140 0.1264585096 - - PREDICTED: actin-related protein 2/3 complex subunit 3 [Populus euphratica]

Gene co-expression network

sample Hb_001019_080 Hb_001019_080 Hb_001814_070 Hb_001814_070 Hb_001019_080--Hb_001814_070 Hb_002289_120 Hb_002289_120 Hb_001019_080--Hb_002289_120 Hb_000010_210 Hb_000010_210 Hb_001019_080--Hb_000010_210 Hb_000840_190 Hb_000840_190 Hb_001019_080--Hb_000840_190 Hb_007432_080 Hb_007432_080 Hb_001019_080--Hb_007432_080 Hb_007875_030 Hb_007875_030 Hb_001019_080--Hb_007875_030 Hb_001814_070--Hb_002289_120 Hb_003878_010 Hb_003878_010 Hb_001814_070--Hb_003878_010 Hb_128048_010 Hb_128048_010 Hb_001814_070--Hb_128048_010 Hb_001814_070--Hb_007875_030 Hb_001016_030 Hb_001016_030 Hb_001814_070--Hb_001016_030 Hb_019249_010 Hb_019249_010 Hb_001814_070--Hb_019249_010 Hb_000152_420 Hb_000152_420 Hb_002289_120--Hb_000152_420 Hb_001369_640 Hb_001369_640 Hb_002289_120--Hb_001369_640 Hb_002289_120--Hb_128048_010 Hb_002289_120--Hb_019249_010 Hb_002289_120--Hb_003878_010 Hb_000010_210--Hb_007432_080 Hb_000010_210--Hb_002289_120 Hb_000186_190 Hb_000186_190 Hb_000010_210--Hb_000186_190 Hb_086703_010 Hb_086703_010 Hb_000010_210--Hb_086703_010 Hb_000010_210--Hb_003878_010 Hb_008695_040 Hb_008695_040 Hb_000840_190--Hb_008695_040 Hb_010883_150 Hb_010883_150 Hb_000840_190--Hb_010883_150 Hb_046157_020 Hb_046157_020 Hb_000840_190--Hb_046157_020 Hb_001421_060 Hb_001421_060 Hb_000840_190--Hb_001421_060 Hb_001824_010 Hb_001824_010 Hb_000840_190--Hb_001824_010 Hb_000086_550 Hb_000086_550 Hb_000840_190--Hb_000086_550 Hb_000163_160 Hb_000163_160 Hb_007432_080--Hb_000163_160 Hb_010180_020 Hb_010180_020 Hb_007432_080--Hb_010180_020 Hb_001279_310 Hb_001279_310 Hb_007432_080--Hb_001279_310 Hb_001279_070 Hb_001279_070 Hb_007432_080--Hb_001279_070 Hb_004306_020 Hb_004306_020 Hb_007432_080--Hb_004306_020 Hb_168054_010 Hb_168054_010 Hb_007432_080--Hb_168054_010 Hb_007875_030--Hb_003878_010 Hb_002893_050 Hb_002893_050 Hb_007875_030--Hb_002893_050 Hb_000610_050 Hb_000610_050 Hb_007875_030--Hb_000610_050 Hb_024071_020 Hb_024071_020 Hb_007875_030--Hb_024071_020 Hb_001047_240 Hb_001047_240 Hb_007875_030--Hb_001047_240 Hb_001140_370 Hb_001140_370 Hb_007875_030--Hb_001140_370
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
39.5558 8.40879 24.7157 37.9421 18.1768 46.34
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
73.0491 85.8246 21.1429 31.4414 5.15597

CAGE analysis