Hb_000157_090

Information

Type -
Description -
Location Contig157: 72544-73886
Sequence    

Annotation

kegg
ID rcu:RCOM_0855090
description Protein C10orf22, putative
nr
ID XP_012083031.1
description PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
swissprot
ID Q9LXG9
description Plant cysteine oxidase 1 OS=Arabidopsis thaliana GN=PCO1 PE=1 SV=1
trembl
ID A0A067LE05
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09732 PE=4 SV=1
Gene Ontology
ID GO:0047800
description 2-aminoethanethiol dioxygenase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000157_090 0.0 - - PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
2 Hb_000565_030 0.0690919998 - - PREDICTED: 40S ribosomal protein S26-3-like [Jatropha curcas]
3 Hb_033153_090 0.1081580083 - - PREDICTED: 28 kDa heat- and acid-stable phosphoprotein [Jatropha curcas]
4 Hb_001377_150 0.1110511521 - - hypothetical protein JCGZ_14266 [Jatropha curcas]
5 Hb_004297_070 0.1121077983 - - hypothetical protein POPTR_0009s14820g [Populus trichocarpa]
6 Hb_168054_010 0.1139340148 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP18-1 [Elaeis guineensis]
7 Hb_001314_100 0.1226914428 - - hypothetical protein POPTR_0001s01820g [Populus trichocarpa]
8 Hb_012573_070 0.1254646209 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001369_660 0.1264945949 - - hypothetical protein B456_001G174200, partial [Gossypium raimondii]
10 Hb_001279_310 0.1269074562 - - hypothetical protein JCGZ_10212 [Jatropha curcas]
11 Hb_007432_080 0.1269835265 - - PREDICTED: mannose-6-phosphate isomerase 1-like [Jatropha curcas]
12 Hb_000163_160 0.1273153837 - - Putative small nuclear ribonucleoprotein Sm D2 [Glycine soja]
13 Hb_001814_070 0.1275178685 - - PREDICTED: uncharacterized protein LOC105650638 [Jatropha curcas]
14 Hb_175215_010 0.1278057782 - - hypothetical protein CISIN_1g029605mg [Citrus sinensis]
15 Hb_007229_070 0.1290390471 - - PREDICTED: UPF0565 protein C2orf69 [Jatropha curcas]
16 Hb_002112_020 0.1290653301 - - 60S ribosomal protein L9, putative [Ricinus communis]
17 Hb_002289_120 0.1294952208 - - PREDICTED: uncharacterized protein LOC105645218 isoform X2 [Jatropha curcas]
18 Hb_001019_080 0.1299643621 - - hypothetical protein JCGZ_13280 [Jatropha curcas]
19 Hb_128048_010 0.1312498082 - - small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus communis]
20 Hb_042083_050 0.1323860408 - - 60S ribosomal protein L11, putative [Ricinus communis]

Gene co-expression network

sample Hb_000157_090 Hb_000157_090 Hb_000565_030 Hb_000565_030 Hb_000157_090--Hb_000565_030 Hb_033153_090 Hb_033153_090 Hb_000157_090--Hb_033153_090 Hb_001377_150 Hb_001377_150 Hb_000157_090--Hb_001377_150 Hb_004297_070 Hb_004297_070 Hb_000157_090--Hb_004297_070 Hb_168054_010 Hb_168054_010 Hb_000157_090--Hb_168054_010 Hb_001314_100 Hb_001314_100 Hb_000157_090--Hb_001314_100 Hb_009486_150 Hb_009486_150 Hb_000565_030--Hb_009486_150 Hb_004052_020 Hb_004052_020 Hb_000565_030--Hb_004052_020 Hb_002742_050 Hb_002742_050 Hb_000565_030--Hb_002742_050 Hb_012573_070 Hb_012573_070 Hb_000565_030--Hb_012573_070 Hb_000565_030--Hb_001314_100 Hb_001421_060 Hb_001421_060 Hb_033153_090--Hb_001421_060 Hb_000926_300 Hb_000926_300 Hb_033153_090--Hb_000926_300 Hb_033153_090--Hb_012573_070 Hb_006816_530 Hb_006816_530 Hb_033153_090--Hb_006816_530 Hb_001476_080 Hb_001476_080 Hb_033153_090--Hb_001476_080 Hb_000815_040 Hb_000815_040 Hb_033153_090--Hb_000815_040 Hb_002893_060 Hb_002893_060 Hb_001377_150--Hb_002893_060 Hb_001377_150--Hb_004297_070 Hb_003018_120 Hb_003018_120 Hb_001377_150--Hb_003018_120 Hb_000573_070 Hb_000573_070 Hb_001377_150--Hb_000573_070 Hb_002518_050 Hb_002518_050 Hb_001377_150--Hb_002518_050 Hb_000933_180 Hb_000933_180 Hb_001377_150--Hb_000933_180 Hb_001278_110 Hb_001278_110 Hb_004297_070--Hb_001278_110 Hb_181288_010 Hb_181288_010 Hb_004297_070--Hb_181288_010 Hb_003266_050 Hb_003266_050 Hb_004297_070--Hb_003266_050 Hb_070986_010 Hb_070986_010 Hb_004297_070--Hb_070986_010 Hb_003874_020 Hb_003874_020 Hb_004297_070--Hb_003874_020 Hb_010180_020 Hb_010180_020 Hb_168054_010--Hb_010180_020 Hb_001369_660 Hb_001369_660 Hb_168054_010--Hb_001369_660 Hb_168054_010--Hb_001314_100 Hb_001604_080 Hb_001604_080 Hb_168054_010--Hb_001604_080 Hb_003687_110 Hb_003687_110 Hb_168054_010--Hb_003687_110 Hb_165132_010 Hb_165132_010 Hb_168054_010--Hb_165132_010 Hb_001314_100--Hb_012573_070 Hb_001369_640 Hb_001369_640 Hb_001314_100--Hb_001369_640 Hb_001314_100--Hb_165132_010 Hb_000029_200 Hb_000029_200 Hb_001314_100--Hb_000029_200 Hb_134949_020 Hb_134949_020 Hb_001314_100--Hb_134949_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.88756 0.476628 1.41625 0.856187 0.526847 2.35284
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.01099 3.38515 0.758009 0.847781 0.417928

CAGE analysis