Gene annotation
Transcriptome id Sobic.010G278200.1
Synonym
Functional annotation expressed protein
UniProt A0A194YLZ2
Pfam -
Panther DB PTHR15141 PTHR15141:SF48
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24200 : Transcription elongation factor (TFIIS) family protein
RAP-DB (Rice) LOC_Os06g42490.1 : expressed protein
MaizeGDB (Corn) Zm00025a018586 , Zm00025a041673
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G147100 VHS and GAT domain containing protein, expressed -
2 Sobic.009G138100 disease resistance protein RGA3, putative, expressed -
3 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
4 Sobic.001G124200 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
5 Sobic.006G033200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
6 Sobic.005G126600 OsFBL55 - F-box domain and LRR containing protein, expressed -
7 Sobic.003G118200 phosphoadenosine phosphosulfate, putative, expressed -
8 Sobic.003G316500 expressed protein -
9 Sobic.008G124900 heat shock protein DnaJ, putative, expressed -
10 Sobic.002G045600 transcriptional corepressor SEUSS, putative, expressed -
11 Sobic.007G093800 expressed protein -
12 Sobic.004G323700 zinc finger family protein, putative, expressed -
13 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
14 Sobic.006G115600 expressed protein -
15 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
16 Sobic.003G248200 NLI interacting factor-like phosphatase, putative, expressed -
17 Sobic.003G352200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
19 Sobic.001G441400 transcription factor, putative, expressed K09060: plant G-box-binding factor
20 Sobic.009G228700 expressed protein -


Gene co-expression network
sample Sobic010G278200 Sobic010G278200 Sobic010G147100 Sobic010G147100 Sobic010G278200--Sobic010G147100 Sobic009G138100 Sobic009G138100 Sobic010G278200--Sobic009G138100 Sobic010G130000 Sobic010G130000 Sobic010G278200--Sobic010G130000 Sobic001G124200 Sobic001G124200 Sobic010G278200--Sobic001G124200 Sobic006G033200 Sobic006G033200 Sobic010G278200--Sobic006G033200 Sobic005G126600 Sobic005G126600 Sobic010G278200--Sobic005G126600 Sobic003G118200 Sobic003G118200 Sobic010G278200--Sobic003G118200 Sobic003G316500 Sobic003G316500 Sobic010G278200--Sobic003G316500 Sobic008G124900 Sobic008G124900 Sobic010G278200--Sobic008G124900 Sobic010G147100--Sobic003G316500 Sobic010G147100--Sobic010G278200 Sobic010G074300 Sobic010G074300 Sobic010G147100--Sobic010G074300 Sobic003G313500 Sobic003G313500 Sobic010G147100--Sobic003G313500 Sobic001G390800 Sobic001G390800 Sobic010G147100--Sobic001G390800 Sobic002G311100 Sobic002G311100 Sobic010G147100--Sobic002G311100 Sobic009G053900 Sobic009G053900 Sobic010G147100--Sobic009G053900 Sobic001G268200 Sobic001G268200 Sobic010G147100--Sobic001G268200 Sobic010G147100--Sobic003G118200 Sobic009G138100--Sobic010G278200 Sobic009G138100--Sobic010G130000 Sobic003G248200 Sobic003G248200 Sobic009G138100--Sobic003G248200 Sobic009G138100--Sobic001G124200 Sobic009G138100--Sobic006G033200 Sobic009G228700 Sobic009G228700 Sobic009G138100--Sobic009G228700 Sobic004G066200 Sobic004G066200 Sobic009G138100--Sobic004G066200 Sobic009G219000 Sobic009G219000 Sobic009G138100--Sobic009G219000 Sobic001G323000 Sobic001G323000 Sobic009G138100--Sobic001G323000 Sobic010G130000--Sobic006G033200 Sobic010G130000--Sobic010G278200 Sobic010G130000--Sobic009G138100 Sobic006G034000 Sobic006G034000 Sobic010G130000--Sobic006G034000 Sobic003G312200 Sobic003G312200 Sobic010G130000--Sobic003G312200 Sobic010G130000--Sobic001G124200 Sobic010G130000--Sobic001G390800 Sobic001G085100 Sobic001G085100 Sobic010G130000--Sobic001G085100 Sobic010G130000--Sobic008G124900 Sobic010G205800 Sobic010G205800 Sobic001G124200--Sobic010G205800 Sobic010G020300 Sobic010G020300 Sobic001G124200--Sobic010G020300 Sobic003G155900 Sobic003G155900 Sobic001G124200--Sobic003G155900 Sobic004G039600 Sobic004G039600 Sobic001G124200--Sobic004G039600 Sobic001G124200--Sobic010G278200 Sobic007G132100 Sobic007G132100 Sobic001G124200--Sobic007G132100 Sobic001G124200--Sobic009G138100 Sobic001G124200--Sobic001G390800 Sobic001G124200--Sobic009G228700 Sobic006G033200--Sobic010G130000 Sobic006G033200--Sobic008G124900 Sobic006G033200--Sobic010G278200 Sobic006G033200--Sobic009G138100 Sobic007G093800 Sobic007G093800 Sobic006G033200--Sobic007G093800 Sobic004G202500 Sobic004G202500 Sobic006G033200--Sobic004G202500 Sobic007G179800 Sobic007G179800 Sobic006G033200--Sobic007G179800 Sobic003G302900 Sobic003G302900 Sobic006G033200--Sobic003G302900 Sobic006G033200--Sobic003G312200 Sobic005G126600--Sobic010G278200 Sobic005G126600--Sobic003G316500 Sobic002G045600 Sobic002G045600 Sobic005G126600--Sobic002G045600 Sobic005G126600--Sobic010G147100 Sobic001G050200 Sobic001G050200 Sobic005G126600--Sobic001G050200 Sobic005G100700 Sobic005G100700 Sobic005G126600--Sobic005G100700 Sobic003G372500 Sobic003G372500 Sobic005G126600--Sobic003G372500 Sobic003G221900 Sobic003G221900 Sobic005G126600--Sobic003G221900 Sobic004G200200 Sobic004G200200 Sobic005G126600--Sobic004G200200 Sobic003G118200--Sobic009G053900 Sobic009G191000 Sobic009G191000 Sobic003G118200--Sobic009G191000 Sobic009G113000 Sobic009G113000 Sobic003G118200--Sobic009G113000 Sobic003G422500 Sobic003G422500 Sobic003G118200--Sobic003G422500 Sobic002G008900 Sobic002G008900 Sobic003G118200--Sobic002G008900 Sobic004G347400 Sobic004G347400 Sobic003G118200--Sobic004G347400 Sobic007G075400 Sobic007G075400 Sobic003G118200--Sobic007G075400 Sobic001G451400 Sobic001G451400 Sobic003G118200--Sobic001G451400 Sobic003G118200--Sobic003G313500 Sobic001G534700 Sobic001G534700 Sobic003G316500--Sobic001G534700 Sobic003G316500--Sobic009G053900 Sobic009G074400 Sobic009G074400 Sobic003G316500--Sobic009G074400 Sobic001G389100 Sobic001G389100 Sobic003G316500--Sobic001G389100 Sobic003G316500--Sobic010G147100 Sobic001G365900 Sobic001G365900 Sobic003G316500--Sobic001G365900 Sobic009G165700 Sobic009G165700 Sobic003G316500--Sobic009G165700 Sobic003G316500--Sobic001G451400 Sobic010G206900 Sobic010G206900 Sobic003G316500--Sobic010G206900 Sobic008G124900--Sobic007G093800 Sobic003G119700 Sobic003G119700 Sobic008G124900--Sobic003G119700 Sobic008G124900--Sobic006G033200 Sobic001G096000 Sobic001G096000 Sobic008G124900--Sobic001G096000 Sobic008G124900--Sobic010G278200 Sobic006G131000 Sobic006G131000 Sobic008G124900--Sobic006G131000 Sobic003G104000 Sobic003G104000 Sobic008G124900--Sobic003G104000 Sobic010G249100 Sobic010G249100 Sobic008G124900--Sobic010G249100 Sobic009G068500 Sobic009G068500 Sobic008G124900--Sobic009G068500
Octagon: transcription factors


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