Gene annotation
Transcriptome id Sobic.009G228700.1
Synonym Sb09g028150, NINJA
Functional annotation expressed protein
UniProt C5YVG5
Pfam PF16135 PF07897
Panther DB PTHR31413 PTHR31413:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT4G28910 : novel interactor of JAZ
RAP-DB (Rice) LOC_Os05g48500.2 : expressed protein
MaizeGDB (Corn) Zm00025a036572
Brachypodium -
Barley HORVU1Hr1G085880.4 , HORVU1Hr1G085880.5 , HORVU1Hr1G085880.1 , HORVU1Hr1G085880.2 , HORVU1Hr1G085880.3
Wheat TraesCS1D02G397600 , TraesCS4B02G104700 , TraesCS1A02G389500
Populus -


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cDNA sequences
Sobic.009G228700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
2 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -
3 Sobic.001G091300 HTH DNA-binding protein, putative, expressed -
4 Sobic.001G323000 UBX domain-containing protein, putative, expressed K18726: FAF2, FAS-associated factor 2
5 Sobic.001G356600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
6 Sobic.006G249700 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
7 Sobic.006G148200 glycosyl transferase 8 domain containing protein, putative, expressed -
8 Sobic.003G312200 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
9 Sobic.001G124200 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
10 Sobic.006G017000 WD domain, G-beta repeat domain containing protein, expressed K12862: PLRG1, PRL1, pleiotropic regulator 1
11 Sobic.010G261600 ubiquitin interaction motif family protein, expressed -
12 Sobic.004G003401 - -
13 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
14 Sobic.001G085100 expressed protein -
15 Sobic.009G257200 CK1_CaseinKinase_1.8 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
16 Sobic.004G275700 adaptor complexes medium subunit family domain containing protein, expressed K11826: AP-2 complex subunit mu-1
17 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
18 Sobic.001G047400 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
19 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
20 Sobic.001G360200 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE


Gene co-expression network
sample Sobic009G228700 Sobic009G228700 Sobic004G066200 Sobic004G066200 Sobic009G228700--Sobic004G066200 Sobic009G207000 Sobic009G207000 Sobic009G228700--Sobic009G207000 Sobic001G091300 Sobic001G091300 Sobic009G228700--Sobic001G091300 Sobic001G323000 Sobic001G323000 Sobic009G228700--Sobic001G323000 Sobic001G356600 Sobic001G356600 Sobic009G228700--Sobic001G356600 Sobic006G249700 Sobic006G249700 Sobic009G228700--Sobic006G249700 Sobic006G148200 Sobic006G148200 Sobic009G228700--Sobic006G148200 Sobic003G312200 Sobic003G312200 Sobic009G228700--Sobic003G312200 Sobic001G124200 Sobic001G124200 Sobic009G228700--Sobic001G124200 Sobic004G066200--Sobic001G356600 Sobic004G066200--Sobic009G228700 Sobic006G101700 Sobic006G101700 Sobic004G066200--Sobic006G101700 Sobic001G080700 Sobic001G080700 Sobic004G066200--Sobic001G080700 Sobic001G392300 Sobic001G392300 Sobic004G066200--Sobic001G392300 Sobic003G352200 Sobic003G352200 Sobic004G066200--Sobic003G352200 Sobic003G248200 Sobic003G248200 Sobic004G066200--Sobic003G248200 Sobic004G353200 Sobic004G353200 Sobic004G066200--Sobic004G353200 Sobic004G066200--Sobic001G091300 Sobic009G207000--Sobic009G228700 Sobic009G207000--Sobic004G066200 Sobic001G199100 Sobic001G199100 Sobic009G207000--Sobic001G199100 Sobic009G207000--Sobic001G323000 Sobic001G085100 Sobic001G085100 Sobic009G207000--Sobic001G085100 Sobic009G207000--Sobic006G249700 Sobic009G207000--Sobic006G148200 Sobic010G000900 Sobic010G000900 Sobic009G207000--Sobic010G000900 Sobic003G012200 Sobic003G012200 Sobic009G207000--Sobic003G012200 Sobic001G091300--Sobic009G228700 Sobic001G091300--Sobic003G312200 Sobic004G275700 Sobic004G275700 Sobic001G091300--Sobic004G275700 Sobic001G091300--Sobic004G066200 Sobic001G091300--Sobic001G085100 Sobic001G512300 Sobic001G512300 Sobic001G091300--Sobic001G512300 Sobic001G261436 Sobic001G261436 Sobic001G091300--Sobic001G261436 Sobic001G091300--Sobic001G199100 Sobic002G303600 Sobic002G303600 Sobic001G091300--Sobic002G303600 Sobic001G206900 Sobic001G206900 Sobic001G323000--Sobic001G206900 Sobic006G034000 Sobic006G034000 Sobic001G323000--Sobic006G034000 Sobic001G323000--Sobic009G228700 Sobic001G057800 Sobic001G057800 Sobic001G323000--Sobic001G057800 Sobic001G323000--Sobic003G312200 Sobic001G323000--Sobic006G148200 Sobic001G323000--Sobic009G207000 Sobic001G323000--Sobic010G000900 Sobic001G323000--Sobic001G085100 Sobic001G356600--Sobic004G066200 Sobic001G356600--Sobic003G248200 Sobic002G034600 Sobic002G034600 Sobic001G356600--Sobic002G034600 Sobic001G512700 Sobic001G512700 Sobic001G356600--Sobic001G512700 Sobic001G356600--Sobic009G228700 Sobic009G179700 Sobic009G179700 Sobic001G356600--Sobic009G179700 Sobic010G018700 Sobic010G018700 Sobic001G356600--Sobic010G018700 Sobic008G179700 Sobic008G179700 Sobic001G356600--Sobic008G179700 Sobic004G274200 Sobic004G274200 Sobic001G356600--Sobic004G274200 Sobic006G249700--Sobic009G228700 Sobic006G249700--Sobic009G207000 Sobic004G348300 Sobic004G348300 Sobic006G249700--Sobic004G348300 Sobic006G249700--Sobic003G312200 Sobic002G352600 Sobic002G352600 Sobic006G249700--Sobic002G352600 Sobic006G249700--Sobic004G275700 Sobic006G249700--Sobic001G323000 Sobic006G249700--Sobic006G148200 Sobic009G138100 Sobic009G138100 Sobic006G249700--Sobic009G138100 Sobic004G274400 Sobic004G274400 Sobic006G148200--Sobic004G274400 Sobic006G148200--Sobic001G085100 Sobic006G148200--Sobic006G034000 Sobic006G148200--Sobic001G323000 Sobic006G148200--Sobic009G228700 Sobic001G033500 Sobic001G033500 Sobic006G148200--Sobic001G033500 Sobic006G148200--Sobic001G206900 Sobic006G148200--Sobic010G000900 Sobic001G048700 Sobic001G048700 Sobic006G148200--Sobic001G048700 Sobic003G312200--Sobic006G034000 Sobic003G312200--Sobic001G091300 Sobic003G312200--Sobic001G323000 Sobic003G312200--Sobic001G206900 Sobic003G312200--Sobic009G228700 Sobic003G312200--Sobic001G261436 Sobic003G312200--Sobic001G085100 Sobic010G130000 Sobic010G130000 Sobic003G312200--Sobic010G130000 Sobic005G074500 Sobic005G074500 Sobic003G312200--Sobic005G074500 Sobic010G205800 Sobic010G205800 Sobic001G124200--Sobic010G205800 Sobic010G020300 Sobic010G020300 Sobic001G124200--Sobic010G020300 Sobic003G155900 Sobic003G155900 Sobic001G124200--Sobic003G155900 Sobic004G039600 Sobic004G039600 Sobic001G124200--Sobic004G039600 Sobic010G278200 Sobic010G278200 Sobic001G124200--Sobic010G278200 Sobic007G132100 Sobic007G132100 Sobic001G124200--Sobic007G132100 Sobic001G124200--Sobic009G138100 Sobic001G390800 Sobic001G390800 Sobic001G124200--Sobic001G390800 Sobic001G124200--Sobic009G228700
Octagon: transcription factors


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