Gene annotation
Transcriptome id Sobic.003G352200.1
Synonym MYB3R-5, Sb03g039470, ATMYB3R5
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5XPP6
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF492
NCBI CDD KOG0048; Transcription factor, Myb superfamily
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G02320 : myb domain protein 3r-5
RAP-DB (Rice) LOC_Os01g62410.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a026903 , Zm00025a039669
Brachypodium KQK10519
Barley HORVU3Hr1G086270.12 , HORVU3Hr1G086270.8 , HORVU3Hr1G086270.4 , HORVU3Hr1G086270.5 , HORVU3Hr1G086270.6 , HORVU3Hr1G086270.7 , HORVU3Hr1G086270.1 , HORVU3Hr1G086270.2 , HORVU3Hr1G086270.3 , HORVU1Hr1G072430.16 , HORVU3Hr1G086270.14 , HORVU3Hr1G086270.13 , HORVU3Hr1G086270.10 , HORVU3Hr1G086270.11
Wheat TraesCS3B02G391900 , TraesCS3A02G359200
Populus -


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cDNA sequences
Sobic.003G352200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
2 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
3 Sobic.002G034600 zinc ion binding protein, putative, expressed -
4 Sobic.004G274200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
5 Sobic.003G155900 mov34/MPN/PAD-1 family protein, expressed K11866: STAMBP, STAM-binding protein
6 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
7 Sobic.002G045600 transcriptional corepressor SEUSS, putative, expressed -
8 Sobic.001G109800 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
9 Sobic.001G088100 transcriptional adaptor, putative, expressed K11314: TADA2A, transcriptional adapter 2-alpha
10 Sobic.007G119200 intracellular protein transport protein USO1-related, putative, expressed -
11 Sobic.008G118200 vesicle tethering family protein, putative, expressed -
12 Sobic.010G069100 expressed protein -
13 Sobic.001G207000 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
14 Sobic.009G177500 CCR4-NOT transcription factor, putative, expressed K12605: CNOT2, CCR4-NOT transcription complex subunit 2
15 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
16 Sobic.001G025000 FACT complex subunit SPT16, putative, expressed -
17 Sobic.010G116600 FHA domain containing protein, putative, expressed -
18 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
19 Sobic.004G146500 ataxin-2 related protein, putative, expressed -
20 Sobic.001G356600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2


Gene co-expression network
sample Sobic003G352200 Sobic003G352200 Sobic009G044800 Sobic009G044800 Sobic003G352200--Sobic009G044800 Sobic001G473600 Sobic001G473600 Sobic003G352200--Sobic001G473600 Sobic002G034600 Sobic002G034600 Sobic003G352200--Sobic002G034600 Sobic004G274200 Sobic004G274200 Sobic003G352200--Sobic004G274200 Sobic003G155900 Sobic003G155900 Sobic003G352200--Sobic003G155900 Sobic004G066200 Sobic004G066200 Sobic003G352200--Sobic004G066200 Sobic002G045600 Sobic002G045600 Sobic003G352200--Sobic002G045600 Sobic001G109800 Sobic001G109800 Sobic003G352200--Sobic001G109800 Sobic001G088100 Sobic001G088100 Sobic003G352200--Sobic001G088100 Sobic003G360400 Sobic003G360400 Sobic009G044800--Sobic003G360400 Sobic009G044800--Sobic003G352200 Sobic001G227400 Sobic001G227400 Sobic009G044800--Sobic001G227400 Sobic009G044800--Sobic002G045600 Sobic010G116600 Sobic010G116600 Sobic009G044800--Sobic010G116600 Sobic007G218000 Sobic007G218000 Sobic009G044800--Sobic007G218000 Sobic001G025000 Sobic001G025000 Sobic009G044800--Sobic001G025000 Sobic001G433800 Sobic001G433800 Sobic009G044800--Sobic001G433800 Sobic007G183900 Sobic007G183900 Sobic009G044800--Sobic007G183900 Sobic001G473600--Sobic002G034600 Sobic001G473600--Sobic003G352200 Sobic007G046200 Sobic007G046200 Sobic001G473600--Sobic007G046200 Sobic001G395100 Sobic001G395100 Sobic001G473600--Sobic001G395100 Sobic004G353000 Sobic004G353000 Sobic001G473600--Sobic004G353000 Sobic007G084100 Sobic007G084100 Sobic001G473600--Sobic007G084100 Sobic001G473600--Sobic001G088100 Sobic007G041300 Sobic007G041300 Sobic001G473600--Sobic007G041300 Sobic007G075900 Sobic007G075900 Sobic001G473600--Sobic007G075900 Sobic009G198100 Sobic009G198100 Sobic002G034600--Sobic009G198100 Sobic007G119200 Sobic007G119200 Sobic002G034600--Sobic007G119200 Sobic003G081000 Sobic003G081000 Sobic002G034600--Sobic003G081000 Sobic002G034600--Sobic001G473600 Sobic003G355000 Sobic003G355000 Sobic002G034600--Sobic003G355000 Sobic007G118200 Sobic007G118200 Sobic002G034600--Sobic007G118200 Sobic002G264200 Sobic002G264200 Sobic002G034600--Sobic002G264200 Sobic001G356600 Sobic001G356600 Sobic002G034600--Sobic001G356600 Sobic010G236400 Sobic010G236400 Sobic002G034600--Sobic010G236400 Sobic008G047800 Sobic008G047800 Sobic004G274200--Sobic008G047800 Sobic004G274200--Sobic010G236400 Sobic004G146500 Sobic004G146500 Sobic004G274200--Sobic004G146500 Sobic004G021100 Sobic004G021100 Sobic004G274200--Sobic004G021100 Sobic008G112800 Sobic008G112800 Sobic004G274200--Sobic008G112800 Sobic004G274200--Sobic003G352200 Sobic004G274200--Sobic009G044800 Sobic002G071500 Sobic002G071500 Sobic004G274200--Sobic002G071500 Sobic001G114000 Sobic001G114000 Sobic004G274200--Sobic001G114000 Sobic003G155900--Sobic003G352200 Sobic007G163100 Sobic007G163100 Sobic003G155900--Sobic007G163100 Sobic001G124200 Sobic001G124200 Sobic003G155900--Sobic001G124200 Sobic006G012500 Sobic006G012500 Sobic003G155900--Sobic006G012500 Sobic001G392300 Sobic001G392300 Sobic003G155900--Sobic001G392300 Sobic002G262900 Sobic002G262900 Sobic003G155900--Sobic002G262900 Sobic010G205800 Sobic010G205800 Sobic003G155900--Sobic010G205800 Sobic003G422900 Sobic003G422900 Sobic003G155900--Sobic003G422900 Sobic003G155900--Sobic002G045600 Sobic004G066200--Sobic001G356600 Sobic009G228700 Sobic009G228700 Sobic004G066200--Sobic009G228700 Sobic006G101700 Sobic006G101700 Sobic004G066200--Sobic006G101700 Sobic001G080700 Sobic001G080700 Sobic004G066200--Sobic001G080700 Sobic004G066200--Sobic001G392300 Sobic004G066200--Sobic003G352200 Sobic003G248200 Sobic003G248200 Sobic004G066200--Sobic003G248200 Sobic004G353200 Sobic004G353200 Sobic004G066200--Sobic004G353200 Sobic001G091300 Sobic001G091300 Sobic004G066200--Sobic001G091300 Sobic003G408600 Sobic003G408600 Sobic002G045600--Sobic003G408600 Sobic009G027300 Sobic009G027300 Sobic002G045600--Sobic009G027300 Sobic002G045600--Sobic009G044800 Sobic002G045600--Sobic007G163100 Sobic002G045600--Sobic003G360400 Sobic001G313700 Sobic001G313700 Sobic002G045600--Sobic001G313700 Sobic004G200200 Sobic004G200200 Sobic002G045600--Sobic004G200200 Sobic001G207000 Sobic001G207000 Sobic002G045600--Sobic001G207000 Sobic003G422500 Sobic003G422500 Sobic002G045600--Sobic003G422500 Sobic001G109800--Sobic004G146500 Sobic004G264400 Sobic004G264400 Sobic001G109800--Sobic004G264400 Sobic002G297200 Sobic002G297200 Sobic001G109800--Sobic002G297200 Sobic001G109800--Sobic007G119200 Sobic009G166300 Sobic009G166300 Sobic001G109800--Sobic009G166300 Sobic001G409600 Sobic001G409600 Sobic001G109800--Sobic001G409600 Sobic001G109800--Sobic002G071500 Sobic001G220300 Sobic001G220300 Sobic001G109800--Sobic001G220300 Sobic009G026500 Sobic009G026500 Sobic001G109800--Sobic009G026500 Sobic009G005500 Sobic009G005500 Sobic001G088100--Sobic009G005500 Sobic001G088100--Sobic007G119200 Sobic010G069100 Sobic010G069100 Sobic001G088100--Sobic010G069100 Sobic001G088100--Sobic010G236400 Sobic003G394300 Sobic003G394300 Sobic001G088100--Sobic003G394300 Sobic007G105100 Sobic007G105100 Sobic001G088100--Sobic007G105100 Sobic001G241200 Sobic001G241200 Sobic001G088100--Sobic001G241200 Sobic001G088100--Sobic004G274200 Sobic001G088100--Sobic003G408600
Octagon: transcription factors


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