Gene annotation
Transcriptome id Sobic.010G251700.1
Synonym ATHKT1, Sb10g029000, HKT1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
OsHKT2
4 - Na+ transporter, expressed
UniProt C5Z968
Pfam PF02386
Panther DB PTHR31064 PTHR31064:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008324; cation transmembrane transporter activity GO:0006812cation transport


Orthologs (automatic annotation)
TAIR AT4G10310 : high-affinity K+ transporter 1
RAP-DB (Rice) LOC_Os06g48800.1 : OsHKT2;4 - Na+ transporter, expressed
MaizeGDB (Corn) Zm00025a018369
Brachypodium -
Barley -
Wheat TraesCS7A02G418600 , TraesCS7D02G411300 , TraesCS7B02G318800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G027600 expressed protein -
2 Sobic.005G231500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA-type ATPase family protein, putative, expressed -
3 Sobic.004G112100 -(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsRhmbd6 - Putative Rhomboid homologue, expressed -
4 Sobic.004G356400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.001G446100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.004G189800 ABC1 family domain containing protein, putative, expressed -
7 Sobic.003G021100 expressed protein -
8 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
9 Sobic.007G142200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
10 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
11 Sobic.009G054900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@relA-SpoT like protein RSH4, putative, expressed -
12 Sobic.010G275700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
13 Sobic.004G154200 expressed protein -
14 Sobic.007G000900 flap endonuclease, putative, expressed K15338: GEN1, flap endonuclease GEN
15 Sobic.006G153400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, AFG1 family domain containing protein, expressed -
16 Sobic.003G127800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
18 Sobic.010G085100 geminivirus Rep-interacting motor protein, putative, expressed -
19 Sobic.009G256100 expressed protein -
20 Sobic.001G134100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-AMP-activated protein kinase-related, putative, expressed -


Gene co-expression network
sample Sobic010G251700 Sobic010G251700 Sobic004G027600 Sobic004G027600 Sobic010G251700--Sobic004G027600 Sobic005G231500 Sobic005G231500 Sobic010G251700--Sobic005G231500 Sobic004G112100 Sobic004G112100 Sobic010G251700--Sobic004G112100 Sobic004G356400 Sobic004G356400 Sobic010G251700--Sobic004G356400 Sobic001G446100 Sobic001G446100 Sobic010G251700--Sobic001G446100 Sobic004G189800 Sobic004G189800 Sobic010G251700--Sobic004G189800 Sobic003G021100 Sobic003G021100 Sobic010G251700--Sobic003G021100 Sobic001G329400 Sobic001G329400 Sobic010G251700--Sobic001G329400 Sobic007G142200 Sobic007G142200 Sobic010G251700--Sobic007G142200 Sobic004G027600--Sobic004G189800 Sobic003G185900 Sobic003G185900 Sobic004G027600--Sobic003G185900 Sobic004G027600--Sobic010G251700 Sobic004G027600--Sobic004G112100 Sobic009G237100 Sobic009G237100 Sobic004G027600--Sobic009G237100 Sobic010G067100 Sobic010G067100 Sobic004G027600--Sobic010G067100 Sobic010G085100 Sobic010G085100 Sobic004G027600--Sobic010G085100 Sobic001G258200 Sobic001G258200 Sobic004G027600--Sobic001G258200 Sobic005G101200 Sobic005G101200 Sobic004G027600--Sobic005G101200 Sobic003G367500 Sobic003G367500 Sobic005G231500--Sobic003G367500 Sobic005G231500--Sobic010G251700 Sobic005G206300 Sobic005G206300 Sobic005G231500--Sobic005G206300 Sobic004G154200 Sobic004G154200 Sobic005G231500--Sobic004G154200 Sobic007G105500 Sobic007G105500 Sobic005G231500--Sobic007G105500 Sobic005G231500--Sobic001G329400 Sobic001G134100 Sobic001G134100 Sobic005G231500--Sobic001G134100 Sobic005G231500--Sobic004G356400 Sobic004G215800 Sobic004G215800 Sobic005G231500--Sobic004G215800 Sobic006G153400 Sobic006G153400 Sobic004G112100--Sobic006G153400 Sobic009G048900 Sobic009G048900 Sobic004G112100--Sobic009G048900 Sobic010G104800 Sobic010G104800 Sobic004G112100--Sobic010G104800 Sobic004G112100--Sobic004G215800 Sobic009G256100 Sobic009G256100 Sobic004G112100--Sobic009G256100 Sobic003G097600 Sobic003G097600 Sobic004G112100--Sobic003G097600 Sobic002G404800 Sobic002G404800 Sobic004G112100--Sobic002G404800 Sobic007G006400 Sobic007G006400 Sobic004G112100--Sobic007G006400 Sobic004G112100--Sobic004G027600 Sobic001G017300 Sobic001G017300 Sobic004G356400--Sobic001G017300 Sobic004G356400--Sobic005G101200 Sobic006G158100 Sobic006G158100 Sobic004G356400--Sobic006G158100 Sobic004G356400--Sobic003G185900 Sobic004G356400--Sobic007G105500 Sobic001G303200 Sobic001G303200 Sobic004G356400--Sobic001G303200 Sobic004G356400--Sobic009G237100 Sobic004G356400--Sobic004G189800 Sobic004G356400--Sobic001G258200 Sobic001G446100--Sobic007G142200 Sobic001G446100--Sobic004G112100 Sobic001G446100--Sobic009G048900 Sobic001G446100--Sobic010G251700 Sobic001G446100--Sobic006G153400 Sobic006G244000 Sobic006G244000 Sobic001G446100--Sobic006G244000 Sobic001G446100--Sobic009G256100 Sobic001G446100--Sobic001G329400 Sobic007G161500 Sobic007G161500 Sobic001G446100--Sobic007G161500 Sobic004G189800--Sobic005G101200 Sobic004G189800--Sobic001G258200 Sobic004G189800--Sobic004G027600 Sobic004G189800--Sobic009G256100 Sobic004G189800--Sobic003G185900 Sobic005G068700 Sobic005G068700 Sobic004G189800--Sobic005G068700 Sobic004G189800--Sobic002G404800 Sobic002G382700 Sobic002G382700 Sobic004G189800--Sobic002G382700 Sobic008G033000 Sobic008G033000 Sobic004G189800--Sobic008G033000 Sobic010G275700 Sobic010G275700 Sobic003G021100--Sobic010G275700 Sobic003G021100--Sobic005G101200 Sobic004G281800 Sobic004G281800 Sobic003G021100--Sobic004G281800 Sobic003G021100--Sobic004G189800 Sobic009G038900 Sobic009G038900 Sobic003G021100--Sobic009G038900 Sobic003G021100--Sobic010G251700 Sobic003G021100--Sobic010G085100 Sobic003G021100--Sobic004G027600 Sobic008G130000 Sobic008G130000 Sobic003G021100--Sobic008G130000 Sobic003G024300 Sobic003G024300 Sobic001G329400--Sobic003G024300 Sobic001G329400--Sobic007G161500 Sobic001G329400--Sobic006G244000 Sobic003G127800 Sobic003G127800 Sobic001G329400--Sobic003G127800 Sobic009G129300 Sobic009G129300 Sobic001G329400--Sobic009G129300 Sobic007G140800 Sobic007G140800 Sobic001G329400--Sobic007G140800 Sobic004G283100 Sobic004G283100 Sobic001G329400--Sobic004G283100 Sobic001G491000 Sobic001G491000 Sobic001G329400--Sobic001G491000 Sobic009G104800 Sobic009G104800 Sobic001G329400--Sobic009G104800 Sobic007G142200--Sobic001G446100 Sobic007G142200--Sobic001G329400 Sobic007G142200--Sobic007G161500 Sobic007G142200--Sobic006G244000 Sobic007G142200--Sobic010G251700 Sobic007G142200--Sobic001G134100 Sobic007G142200--Sobic004G112100 Sobic007G142200--Sobic005G231500 Sobic007G142200--Sobic004G027600
Octagon: transcription factors


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