Gene annotation
Transcriptome id Sobic.006G153400.1
Synonym Sb06g023090
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
ATPase, AFG1 family domain containing protein, expressed
UniProt A0A1B6PM60
Pfam PF03969
Panther DB PTHR12169 PTHR12169:SF6
NCBI CDD KOG2383; Predicted ATPase
KEGG Orthology -
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT4G30490 : AFG1-like ATPase family protein
RAP-DB (Rice) LOC_Os08g16480.1 : ATPase, AFG1 family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a056541 , Zm00025a010606
Brachypodium KQJ95827 , KQJ95828 , KQJ95829 , KQJ95831 , KQJ95830
Barley HORVU1Hr1G082690.21 , HORVU1Hr1G082690.20 , HORVU1Hr1G082690.8 , HORVU1Hr1G082690.9 , HORVU1Hr1G082690.4 , HORVU1Hr1G082690.5 , HORVU1Hr1G082690.6 , HORVU1Hr1G082690.7 , HORVU1Hr1G082690.2 , HORVU1Hr1G082690.3 , HORVU1Hr1G082690.18 , HORVU1Hr1G082690.19 , HORVU1Hr1G082690.16 , HORVU1Hr1G082690.17 , HORVU1Hr1G082690.15 , HORVU1Hr1G082690.12 , HORVU1Hr1G082690.13 , HORVU1Hr1G082690.10 , HORVU1Hr1G082690.11
Wheat TraesCS1D02G379000 , TraesCS1B02G392400 , TraesCS1B02G392400 , TraesCS1A02G372400 , TraesCS1A02G372400 , TraesCS1D02G379000 , TraesCS1D02G379000 , TraesCS1D02G379000 , TraesCS1B02G392400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G104800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
2 Sobic.009G256100 expressed protein -
3 Sobic.007G006400 - -
4 Sobic.004G112100 -(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsRhmbd6 - Putative Rhomboid homologue, expressed -
5 Sobic.003G127800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
7 Sobic.004G082300 WD domain, G-beta repeat domain containing protein, expressed -
8 Sobic.004G059800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsHKT1@3 - Na+ transporter, expressed -
9 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
10 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.007G058100 light-mediated development protein DET1, putative, expressed K10571: de-etiolated-1
12 Sobic.009G048900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
13 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
14 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
15 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
16 Sobic.010G039500 genetic modifier, putative, expressed -
17 Sobic.003G097600 - -
18 Sobic.001G263100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
19 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
20 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -


Gene co-expression network
sample Sobic006G153400 Sobic006G153400 Sobic010G104800 Sobic010G104800 Sobic006G153400--Sobic010G104800 Sobic009G256100 Sobic009G256100 Sobic006G153400--Sobic009G256100 Sobic007G006400 Sobic007G006400 Sobic006G153400--Sobic007G006400 Sobic004G112100 Sobic004G112100 Sobic006G153400--Sobic004G112100 Sobic003G127800 Sobic003G127800 Sobic006G153400--Sobic003G127800 Sobic001G244600 Sobic001G244600 Sobic006G153400--Sobic001G244600 Sobic004G082300 Sobic004G082300 Sobic006G153400--Sobic004G082300 Sobic004G059800 Sobic004G059800 Sobic006G153400--Sobic004G059800 Sobic005G101200 Sobic005G101200 Sobic006G153400--Sobic005G101200 Sobic001G073300 Sobic001G073300 Sobic010G104800--Sobic001G073300 Sobic010G104800--Sobic006G153400 Sobic010G104800--Sobic009G256100 Sobic010G104800--Sobic007G006400 Sobic008G129900 Sobic008G129900 Sobic010G104800--Sobic008G129900 Sobic010G104800--Sobic004G112100 Sobic010G104800--Sobic001G244600 Sobic006G161500 Sobic006G161500 Sobic010G104800--Sobic006G161500 Sobic002G390100 Sobic002G390100 Sobic010G104800--Sobic002G390100 Sobic009G256100--Sobic010G104800 Sobic009G256100--Sobic006G153400 Sobic009G256100--Sobic002G390100 Sobic007G058100 Sobic007G058100 Sobic009G256100--Sobic007G058100 Sobic007G105500 Sobic007G105500 Sobic009G256100--Sobic007G105500 Sobic002G404800 Sobic002G404800 Sobic009G256100--Sobic002G404800 Sobic003G185900 Sobic003G185900 Sobic009G256100--Sobic003G185900 Sobic004G215800 Sobic004G215800 Sobic009G256100--Sobic004G215800 Sobic009G256100--Sobic008G129900 Sobic003G097600 Sobic003G097600 Sobic007G006400--Sobic003G097600 Sobic007G006400--Sobic010G104800 Sobic007G006400--Sobic006G153400 Sobic007G006400--Sobic008G129900 Sobic007G006400--Sobic004G112100 Sobic007G006400--Sobic004G082300 Sobic007G006400--Sobic009G256100 Sobic007G006400--Sobic004G059800 Sobic007G006400--Sobic003G127800 Sobic004G112100--Sobic006G153400 Sobic009G048900 Sobic009G048900 Sobic004G112100--Sobic009G048900 Sobic004G112100--Sobic010G104800 Sobic004G112100--Sobic004G215800 Sobic004G112100--Sobic009G256100 Sobic004G112100--Sobic003G097600 Sobic004G112100--Sobic002G404800 Sobic004G112100--Sobic007G006400 Sobic004G027600 Sobic004G027600 Sobic004G112100--Sobic004G027600 Sobic007G161500 Sobic007G161500 Sobic003G127800--Sobic007G161500 Sobic003G127800--Sobic004G059800 Sobic010G039500 Sobic010G039500 Sobic003G127800--Sobic010G039500 Sobic001G491000 Sobic001G491000 Sobic003G127800--Sobic001G491000 Sobic009G129300 Sobic009G129300 Sobic003G127800--Sobic009G129300 Sobic005G056400 Sobic005G056400 Sobic003G127800--Sobic005G056400 Sobic001G329400 Sobic001G329400 Sobic003G127800--Sobic001G329400 Sobic003G367500 Sobic003G367500 Sobic003G127800--Sobic003G367500 Sobic003G127800--Sobic006G153400 Sobic001G244600--Sobic008G129900 Sobic001G244600--Sobic010G104800 Sobic001G244600--Sobic006G161500 Sobic001G244600--Sobic009G256100 Sobic001G244600--Sobic001G073300 Sobic001G244600--Sobic007G058100 Sobic001G217900 Sobic001G217900 Sobic001G244600--Sobic001G217900 Sobic008G038500 Sobic008G038500 Sobic001G244600--Sobic008G038500 Sobic010G231300 Sobic010G231300 Sobic001G244600--Sobic010G231300 Sobic004G082300--Sobic007G058100 Sobic004G082300--Sobic009G256100 Sobic004G082300--Sobic008G129900 Sobic009G038701 Sobic009G038701 Sobic004G082300--Sobic009G038701 Sobic001G258200 Sobic001G258200 Sobic004G082300--Sobic001G258200 Sobic002G382700 Sobic002G382700 Sobic004G082300--Sobic002G382700 Sobic004G082300--Sobic003G097600 Sobic001G263100 Sobic001G263100 Sobic004G082300--Sobic001G263100 Sobic004G082300--Sobic006G153400 Sobic004G059800--Sobic003G127800 Sobic004G059800--Sobic009G256100 Sobic004G059800--Sobic009G129300 Sobic004G059800--Sobic003G367500 Sobic004G059800--Sobic003G185900 Sobic004G059800--Sobic004G112100 Sobic004G059800--Sobic006G153400 Sobic004G059800--Sobic010G039500 Sobic004G059800--Sobic004G215800 Sobic004G189800 Sobic004G189800 Sobic005G101200--Sobic004G189800 Sobic005G068700 Sobic005G068700 Sobic005G101200--Sobic005G068700 Sobic005G101200--Sobic002G404800 Sobic005G101200--Sobic001G258200 Sobic009G038900 Sobic009G038900 Sobic005G101200--Sobic009G038900 Sobic005G101200--Sobic007G105500 Sobic005G101200--Sobic003G185900 Sobic010G085100 Sobic010G085100 Sobic005G101200--Sobic010G085100 Sobic004G281800 Sobic004G281800 Sobic005G101200--Sobic004G281800
Octagon: transcription factors


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