Gene annotation
Transcriptome id Sobic.004G082300.1
Synonym
Functional annotation WD domain, G-beta repeat domain containing protein, expressed
UniProt A0A194YNC8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g32350.1 : WD domain, G-beta repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a014745
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G058100 light-mediated development protein DET1, putative, expressed K10571: de-etiolated-1
2 Sobic.009G256100 expressed protein -
3 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.009G038701 - -
5 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
6 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
7 Sobic.003G097600 - -
8 Sobic.001G263100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
9 Sobic.006G153400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, AFG1 family domain containing protein, expressed -
10 Sobic.007G006400 - -
11 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
12 Sobic.001G345100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
13 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
14 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
15 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
16 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
17 Sobic.004G112100 -(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsRhmbd6 - Putative Rhomboid homologue, expressed -
18 Sobic.001G283100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@lrgB-like family protein, expressed -
19 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
20 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic004G082300 Sobic004G082300 Sobic007G058100 Sobic007G058100 Sobic004G082300--Sobic007G058100 Sobic009G256100 Sobic009G256100 Sobic004G082300--Sobic009G256100 Sobic008G129900 Sobic008G129900 Sobic004G082300--Sobic008G129900 Sobic009G038701 Sobic009G038701 Sobic004G082300--Sobic009G038701 Sobic001G258200 Sobic001G258200 Sobic004G082300--Sobic001G258200 Sobic002G382700 Sobic002G382700 Sobic004G082300--Sobic002G382700 Sobic003G097600 Sobic003G097600 Sobic004G082300--Sobic003G097600 Sobic001G263100 Sobic001G263100 Sobic004G082300--Sobic001G263100 Sobic006G153400 Sobic006G153400 Sobic004G082300--Sobic006G153400 Sobic007G058100--Sobic001G263100 Sobic001G217900 Sobic001G217900 Sobic007G058100--Sobic001G217900 Sobic007G058100--Sobic004G082300 Sobic007G058100--Sobic001G258200 Sobic003G341300 Sobic003G341300 Sobic007G058100--Sobic003G341300 Sobic007G058100--Sobic008G129900 Sobic004G143300 Sobic004G143300 Sobic007G058100--Sobic004G143300 Sobic007G058100--Sobic009G256100 Sobic001G345100 Sobic001G345100 Sobic007G058100--Sobic001G345100 Sobic010G104800 Sobic010G104800 Sobic009G256100--Sobic010G104800 Sobic009G256100--Sobic006G153400 Sobic002G390100 Sobic002G390100 Sobic009G256100--Sobic002G390100 Sobic009G256100--Sobic007G058100 Sobic007G105500 Sobic007G105500 Sobic009G256100--Sobic007G105500 Sobic002G404800 Sobic002G404800 Sobic009G256100--Sobic002G404800 Sobic003G185900 Sobic003G185900 Sobic009G256100--Sobic003G185900 Sobic004G215800 Sobic004G215800 Sobic009G256100--Sobic004G215800 Sobic009G256100--Sobic008G129900 Sobic010G231300 Sobic010G231300 Sobic008G129900--Sobic010G231300 Sobic008G033000 Sobic008G033000 Sobic008G129900--Sobic008G033000 Sobic008G129900--Sobic001G258200 Sobic008G129900--Sobic001G217900 Sobic006G235400 Sobic006G235400 Sobic008G129900--Sobic006G235400 Sobic008G129900--Sobic003G097600 Sobic008G129900--Sobic001G263100 Sobic002G206300 Sobic002G206300 Sobic008G129900--Sobic002G206300 Sobic008G129900--Sobic003G341300 Sobic009G038701--Sobic002G206300 Sobic010G125833 Sobic010G125833 Sobic009G038701--Sobic010G125833 Sobic001G504400 Sobic001G504400 Sobic009G038701--Sobic001G504400 Sobic001G180200 Sobic001G180200 Sobic009G038701--Sobic001G180200 Sobic009G038701--Sobic001G258200 Sobic009G038701--Sobic003G185900 Sobic009G038701--Sobic008G129900 Sobic009G038701--Sobic008G033000 Sobic009G207900 Sobic009G207900 Sobic009G038701--Sobic009G207900 Sobic001G258200--Sobic003G185900 Sobic001G258200--Sobic002G382700 Sobic001G258200--Sobic008G129900 Sobic001G258200--Sobic001G504400 Sobic004G189800 Sobic004G189800 Sobic001G258200--Sobic004G189800 Sobic001G258200--Sobic008G033000 Sobic001G258200--Sobic002G206300 Sobic001G359300 Sobic001G359300 Sobic001G258200--Sobic001G359300 Sobic005G068700 Sobic005G068700 Sobic001G258200--Sobic005G068700 Sobic001G207800 Sobic001G207800 Sobic002G382700--Sobic001G207800 Sobic002G382700--Sobic001G258200 Sobic006G090100 Sobic006G090100 Sobic002G382700--Sobic006G090100 Sobic002G382700--Sobic003G341300 Sobic001G283100 Sobic001G283100 Sobic002G382700--Sobic001G283100 Sobic002G382700--Sobic007G058100 Sobic001G077300 Sobic001G077300 Sobic002G382700--Sobic001G077300 Sobic002G162400 Sobic002G162400 Sobic002G382700--Sobic002G162400 Sobic007G227100 Sobic007G227100 Sobic002G382700--Sobic007G227100 Sobic003G097600--Sobic008G129900 Sobic007G006400 Sobic007G006400 Sobic003G097600--Sobic007G006400 Sobic003G097600--Sobic004G215800 Sobic003G097600--Sobic003G185900 Sobic003G097600--Sobic008G033000 Sobic004G112100 Sobic004G112100 Sobic003G097600--Sobic004G112100 Sobic003G097600--Sobic004G082300 Sobic003G097600--Sobic009G038701 Sobic003G097600--Sobic001G258200 Sobic001G263100--Sobic007G058100 Sobic001G263100--Sobic010G231300 Sobic001G263100--Sobic008G129900 Sobic001G263100--Sobic002G162400 Sobic001G263100--Sobic001G180200 Sobic001G263100--Sobic001G217900 Sobic001G263100--Sobic003G341300 Sobic001G263100--Sobic002G206300 Sobic001G263100--Sobic006G235400 Sobic006G153400--Sobic010G104800 Sobic006G153400--Sobic009G256100 Sobic006G153400--Sobic007G006400 Sobic006G153400--Sobic004G112100 Sobic003G127800 Sobic003G127800 Sobic006G153400--Sobic003G127800 Sobic001G244600 Sobic001G244600 Sobic006G153400--Sobic001G244600 Sobic006G153400--Sobic004G082300 Sobic004G059800 Sobic004G059800 Sobic006G153400--Sobic004G059800 Sobic005G101200 Sobic005G101200 Sobic006G153400--Sobic005G101200
Octagon: transcription factors


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