Gene annotation
Transcriptome id Sobic.004G286500.3,Sobic.004G286500.1,Sobic.004G286500.2
Synonym Sb04g032240
Functional annotation DHHC zinc finger domain containing protein, expressed
UniProt A0A1Z5RPJ5 , A0A194YS21
Pfam PF01529
Panther DB PTHR22883 PTHR22883:SF33
NCBI CDD -
KEGG Orthology K18932; palmitoyltransferase
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT3G51390 : DHHC-type zinc finger family protein
RAP-DB (Rice) LOC_Os12g29560.1 : DHHC zinc finger domain containing protein, expressed
MaizeGDB (Corn) Zm00025a032269 , Zm00025a021465
Brachypodium KQK00691 , KQK00692
Barley HORVU6Hr1G064630.5 , HORVU6Hr1G064630.4 , HORVU6Hr1G064630.7 , HORVU6Hr1G064630.1 , HORVU6Hr1G064630.3 , HORVU6Hr1G064630.2 , HORVU6Hr1G064630.9 , HORVU6Hr1G064630.10
Wheat TraesCS6B02G272000 , TraesCS6A02G253400 , TraesCS6D02G234900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G515000 protein-S-isoprenylcysteine O-methyltransferase. tax, putative, expressed K00587: ICMT, protein-S-isoprenylcysteine O-methyltransferase
2 Sobic.008G046500 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
3 Sobic.006G163800 diacylglycerol kinase, putative, expressed -
4 Sobic.003G187200 phox domain-containing protein, putative, expressed -
5 Sobic.010G053800 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
6 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
7 Sobic.007G027700 expressed protein -
8 Sobic.006G012500 protein transport protein Sec24-like, putative, expressed K14007: protein transport protein SEC24
9 Sobic.001G094900 protein transport protein Sec23B, putative, expressed K14006: protein transport protein SEC23
10 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
11 Sobic.K004100 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.004G323700 zinc finger family protein, putative, expressed -
13 Sobic.006G131000 expressed protein K11968: ariadne-1
14 Sobic.006G278700 expressed protein -
15 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
16 Sobic.007G120500 Sec1 family transport protein, putative, expressed K12479: vacuolar protein sorting-associated protein 45
17 Sobic.003G205501 - -
18 Sobic.001G261456 - -
19 Sobic.001G369000 adapitin protein, putative, expressed K12392: AP-1 complex subunit beta-1
20 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -


Gene co-expression network
sample Sobic004G286500 Sobic004G286500 Sobic001G515000 Sobic001G515000 Sobic004G286500--Sobic001G515000 Sobic008G046500 Sobic008G046500 Sobic004G286500--Sobic008G046500 Sobic006G163800 Sobic006G163800 Sobic004G286500--Sobic006G163800 Sobic003G187200 Sobic003G187200 Sobic004G286500--Sobic003G187200 Sobic010G053800 Sobic010G053800 Sobic004G286500--Sobic010G053800 Sobic001G143500 Sobic001G143500 Sobic004G286500--Sobic001G143500 Sobic007G027700 Sobic007G027700 Sobic004G286500--Sobic007G027700 Sobic006G012500 Sobic006G012500 Sobic004G286500--Sobic006G012500 Sobic001G094900 Sobic001G094900 Sobic004G286500--Sobic001G094900 Sobic001G515000--Sobic004G286500 Sobic004G072100 Sobic004G072100 Sobic001G515000--Sobic004G072100 Sobic010G245000 Sobic010G245000 Sobic001G515000--Sobic010G245000 Sobic002G056701 Sobic002G056701 Sobic001G515000--Sobic002G056701 Sobic001G515000--Sobic010G053800 Sobic006G200600 Sobic006G200600 Sobic001G515000--Sobic006G200600 Sobic001G515000--Sobic003G187200 Sobic002G264200 Sobic002G264200 Sobic001G515000--Sobic002G264200 Sobic007G218000 Sobic007G218000 Sobic001G515000--Sobic007G218000 Sobic001G007000 Sobic001G007000 Sobic008G046500--Sobic001G007000 Sobic008G046500--Sobic006G200600 Sobic001G389100 Sobic001G389100 Sobic008G046500--Sobic001G389100 Sobic007G093800 Sobic007G093800 Sobic008G046500--Sobic007G093800 Sobic010G251000 Sobic010G251000 Sobic008G046500--Sobic010G251000 Sobic004G092500 Sobic004G092500 Sobic008G046500--Sobic004G092500 Sobic008G046500--Sobic004G286500 Sobic009G068500 Sobic009G068500 Sobic008G046500--Sobic009G068500 Sobic003G102400 Sobic003G102400 Sobic008G046500--Sobic003G102400 Sobic010G204400 Sobic010G204400 Sobic006G163800--Sobic010G204400 Sobic001G369000 Sobic001G369000 Sobic006G163800--Sobic001G369000 Sobic006G131000 Sobic006G131000 Sobic006G163800--Sobic006G131000 Sobic006G163800--Sobic010G053800 Sobic006G163800--Sobic007G218000 Sobic010G275500 Sobic010G275500 Sobic006G163800--Sobic010G275500 Sobic006G163800--Sobic006G012500 Sobic004G039600 Sobic004G039600 Sobic006G163800--Sobic004G039600 Sobic004G146500 Sobic004G146500 Sobic006G163800--Sobic004G146500 Sobic003G187200--Sobic010G204400 Sobic004G345700 Sobic004G345700 Sobic003G187200--Sobic004G345700 Sobic003G187200--Sobic004G039600 Sobic007G132100 Sobic007G132100 Sobic003G187200--Sobic007G132100 Sobic006G195700 Sobic006G195700 Sobic003G187200--Sobic006G195700 Sobic003G187200--Sobic006G163800 Sobic002G378200 Sobic002G378200 Sobic003G187200--Sobic002G378200 Sobic003G187500 Sobic003G187500 Sobic003G187200--Sobic003G187500 Sobic003G187200--Sobic010G053800 Sobic010G053800--Sobic006G012500 Sobic010G053800--Sobic010G275500 Sobic010G053800--Sobic004G072100 Sobic001G155000 Sobic001G155000 Sobic010G053800--Sobic001G155000 Sobic010G053800--Sobic003G187500 Sobic008G047800 Sobic008G047800 Sobic010G053800--Sobic008G047800 Sobic010G116600 Sobic010G116600 Sobic010G053800--Sobic010G116600 Sobic010G053800--Sobic006G163800 Sobic010G053800--Sobic004G039600 Sobic006G252700 Sobic006G252700 Sobic001G143500--Sobic006G252700 Sobic007G111100 Sobic007G111100 Sobic001G143500--Sobic007G111100 Sobic002G313500 Sobic002G313500 Sobic001G143500--Sobic002G313500 Sobic004G350100 Sobic004G350100 Sobic001G143500--Sobic004G350100 Sobic003G401100 Sobic003G401100 Sobic001G143500--Sobic003G401100 Sobic003G439800 Sobic003G439800 Sobic001G143500--Sobic003G439800 Sobic001G466700 Sobic001G466700 Sobic001G143500--Sobic001G466700 Sobic006G278700 Sobic006G278700 Sobic001G143500--Sobic006G278700 Sobic006G267300 Sobic006G267300 Sobic001G143500--Sobic006G267300 Sobic008G127400 Sobic008G127400 Sobic007G027700--Sobic008G127400 Sobic007G027700--Sobic003G401100 Sobic003G412300 Sobic003G412300 Sobic007G027700--Sobic003G412300 Sobic007G027700--Sobic001G143500 Sobic004G325400 Sobic004G325400 Sobic007G027700--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic007G027700--Sobic005G216300 Sobic001G395100 Sobic001G395100 Sobic007G027700--Sobic001G395100 Sobic010G279900 Sobic010G279900 Sobic007G027700--Sobic010G279900 Sobic007G027700--Sobic006G267300 Sobic006G012500--Sobic004G039600 Sobic006G012500--Sobic010G053800 Sobic008G099800 Sobic008G099800 Sobic006G012500--Sobic008G099800 Sobic006G012500--Sobic010G275500 Sobic006G012500--Sobic004G072100 Sobic001G534800 Sobic001G534800 Sobic006G012500--Sobic001G534800 Sobic001G065000 Sobic001G065000 Sobic006G012500--Sobic001G065000 Sobic006G012500--Sobic007G132100 Sobic006G012500--Sobic007G218000 Sobic010G279700 Sobic010G279700 Sobic001G094900--Sobic010G279700 Sobic006G118700 Sobic006G118700 Sobic001G094900--Sobic006G118700 Sobic001G281600 Sobic001G281600 Sobic001G094900--Sobic001G281600 Sobic008G092300 Sobic008G092300 Sobic001G094900--Sobic008G092300 Sobic007G183900 Sobic007G183900 Sobic001G094900--Sobic007G183900 Sobic008G179700 Sobic008G179700 Sobic001G094900--Sobic008G179700 Sobic001G124200 Sobic001G124200 Sobic001G094900--Sobic001G124200 Sobic001G261456 Sobic001G261456 Sobic001G094900--Sobic001G261456 Sobic001G094900--Sobic003G401100
Octagon: transcription factors


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