Gene annotation
Transcriptome id Sobic.008G046500.1
Synonym CBL3, Sb08g003930, ATCBL3, SbCBL02, calcineurin B-like proteins
Functional annotation Cellular calcium signals (PubMedID : 19860013)
calcineurin B, putative, expressed
UniProt C4P7Y5
Pfam PF13499 PF13202
Panther DB PTHR23056 PTHR23056:SF19
NCBI CDD KOG0034; Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein
KEGG Orthology K06268; PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
Gene Ontology GO:0005509; calcium ion binding


Orthologs (automatic annotation)
TAIR AT4G26570 : calcineurin B-like 3
RAP-DB (Rice) LOC_Os12g06510.1 : calcineurin B, putative, expressed
MaizeGDB (Corn) Zm00025a053981 , Zm00025a053982
Brachypodium KQK16310 , KQJ85981 , KQJ92144 , KQJ92145
Barley HORVU4Hr1G011670.9 , HORVU4Hr1G011670.8 , HORVU4Hr1G011670.3 , HORVU4Hr1G011670.2 , HORVU4Hr1G011670.1 , HORVU4Hr1G011670.7 , HORVU4Hr1G011670.6 , HORVU4Hr1G011670.5 , HORVU4Hr1G011670.4 , HORVU5Hr1G040030.6 , HORVU5Hr1G040030.5 , HORVU5Hr1G040030.2
Wheat TraesCS5B02G124300 , TraesCS4B02G069900 , TraesCS4B02G069900 , TraesCS4B02G069900 , TraesCS5A02G124700 , TraesCS4A02G245500 , TraesCS5D02G132500 , TraesCS5D02G132500 , TraesCS4D02G068700
Populus PNT28972


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G007000 -(PubMedID : 26976818)@4-nitrophenylphosphatase, putative, expressed K19269: PGP, phosphoglycolate phosphatase
2 Sobic.006G200600 expressed protein -
3 Sobic.001G389100 DUF630/DUF632 domains containing protein, putative, expressed -
4 Sobic.007G093800 expressed protein -
5 Sobic.010G251000 ubiquitin-conjugating enzyme, putative, expressed K10579: UBE2M, ubiquitin-conjugating enzyme E2 M
6 Sobic.004G092500 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
7 Sobic.004G286500 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
8 Sobic.009G068500 expressed protein -
9 Sobic.003G102400 expressed protein -
10 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
11 Sobic.001G124200 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
12 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
13 Sobic.008G124900 heat shock protein DnaJ, putative, expressed -
14 Sobic.009G219000 ANTH/ENTH domain containing protein, putative, expressed -
15 Sobic.002G294800 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
16 Sobic.003G443100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
17 Sobic.006G127600 signal peptide peptidase-like 2B, putative, expressed K09597: signal peptide peptidase-like 2B
18 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
19 Sobic.001G031100 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00721: dolichol-phosphate mannosyltransferase
20 Sobic.001G425800 src homology-3 domain protein 3, putative, expressed -


Gene co-expression network
sample Sobic008G046500 Sobic008G046500 Sobic001G007000 Sobic001G007000 Sobic008G046500--Sobic001G007000 Sobic006G200600 Sobic006G200600 Sobic008G046500--Sobic006G200600 Sobic001G389100 Sobic001G389100 Sobic008G046500--Sobic001G389100 Sobic007G093800 Sobic007G093800 Sobic008G046500--Sobic007G093800 Sobic010G251000 Sobic010G251000 Sobic008G046500--Sobic010G251000 Sobic004G092500 Sobic004G092500 Sobic008G046500--Sobic004G092500 Sobic004G286500 Sobic004G286500 Sobic008G046500--Sobic004G286500 Sobic009G068500 Sobic009G068500 Sobic008G046500--Sobic009G068500 Sobic003G102400 Sobic003G102400 Sobic008G046500--Sobic003G102400 Sobic001G007000--Sobic009G068500 Sobic001G007000--Sobic010G251000 Sobic001G392300 Sobic001G392300 Sobic001G007000--Sobic001G392300 Sobic002G359400 Sobic002G359400 Sobic001G007000--Sobic002G359400 Sobic004G353200 Sobic004G353200 Sobic001G007000--Sobic004G353200 Sobic010G205800 Sobic010G205800 Sobic001G007000--Sobic010G205800 Sobic001G007000--Sobic008G046500 Sobic001G080700 Sobic001G080700 Sobic001G007000--Sobic001G080700 Sobic001G031100 Sobic001G031100 Sobic001G007000--Sobic001G031100 Sobic006G200600--Sobic004G353200 Sobic001G281600 Sobic001G281600 Sobic006G200600--Sobic001G281600 Sobic004G121100 Sobic004G121100 Sobic006G200600--Sobic004G121100 Sobic006G200600--Sobic001G392300 Sobic006G200600--Sobic010G251000 Sobic008G047800 Sobic008G047800 Sobic006G200600--Sobic008G047800 Sobic009G205200 Sobic009G205200 Sobic006G200600--Sobic009G205200 Sobic007G078600 Sobic007G078600 Sobic006G200600--Sobic007G078600 Sobic003G248200 Sobic003G248200 Sobic006G200600--Sobic003G248200 Sobic001G451400 Sobic001G451400 Sobic001G389100--Sobic001G451400 Sobic003G316500 Sobic003G316500 Sobic001G389100--Sobic003G316500 Sobic009G165700 Sobic009G165700 Sobic001G389100--Sobic009G165700 Sobic001G534700 Sobic001G534700 Sobic001G389100--Sobic001G534700 Sobic010G206900 Sobic010G206900 Sobic001G389100--Sobic010G206900 Sobic010G247800 Sobic010G247800 Sobic001G389100--Sobic010G247800 Sobic009G053900 Sobic009G053900 Sobic001G389100--Sobic009G053900 Sobic001G365900 Sobic001G365900 Sobic001G389100--Sobic001G365900 Sobic002G252800 Sobic002G252800 Sobic001G389100--Sobic002G252800 Sobic008G124900 Sobic008G124900 Sobic007G093800--Sobic008G124900 Sobic006G131000 Sobic006G131000 Sobic007G093800--Sobic006G131000 Sobic004G178200 Sobic004G178200 Sobic007G093800--Sobic004G178200 Sobic007G093800--Sobic009G068500 Sobic007G093800--Sobic008G046500 Sobic010G278200 Sobic010G278200 Sobic007G093800--Sobic010G278200 Sobic003G264100 Sobic003G264100 Sobic007G093800--Sobic003G264100 Sobic007G093800--Sobic004G092500 Sobic007G218000 Sobic007G218000 Sobic007G093800--Sobic007G218000 Sobic010G251000--Sobic001G007000 Sobic010G251000--Sobic001G080700 Sobic010G251000--Sobic006G200600 Sobic004G066200 Sobic004G066200 Sobic010G251000--Sobic004G066200 Sobic010G251000--Sobic004G121100 Sobic010G251000--Sobic001G392300 Sobic001G047400 Sobic001G047400 Sobic010G251000--Sobic001G047400 Sobic010G251000--Sobic004G353200 Sobic010G251000--Sobic008G046500 Sobic007G132100 Sobic007G132100 Sobic004G092500--Sobic007G132100 Sobic001G493200 Sobic001G493200 Sobic004G092500--Sobic001G493200 Sobic010G223300 Sobic010G223300 Sobic004G092500--Sobic010G223300 Sobic003G143200 Sobic003G143200 Sobic004G092500--Sobic003G143200 Sobic010G020400 Sobic010G020400 Sobic004G092500--Sobic010G020400 Sobic004G257100 Sobic004G257100 Sobic004G092500--Sobic004G257100 Sobic004G039600 Sobic004G039600 Sobic004G092500--Sobic004G039600 Sobic006G077200 Sobic006G077200 Sobic004G092500--Sobic006G077200 Sobic007G167900 Sobic007G167900 Sobic004G092500--Sobic007G167900 Sobic001G515000 Sobic001G515000 Sobic004G286500--Sobic001G515000 Sobic004G286500--Sobic008G046500 Sobic006G163800 Sobic006G163800 Sobic004G286500--Sobic006G163800 Sobic003G187200 Sobic003G187200 Sobic004G286500--Sobic003G187200 Sobic010G053800 Sobic010G053800 Sobic004G286500--Sobic010G053800 Sobic001G143500 Sobic001G143500 Sobic004G286500--Sobic001G143500 Sobic007G027700 Sobic007G027700 Sobic004G286500--Sobic007G027700 Sobic006G012500 Sobic006G012500 Sobic004G286500--Sobic006G012500 Sobic001G094900 Sobic001G094900 Sobic004G286500--Sobic001G094900 Sobic009G068500--Sobic001G007000 Sobic001G193300 Sobic001G193300 Sobic009G068500--Sobic001G193300 Sobic009G068500--Sobic003G264100 Sobic009G068500--Sobic007G093800 Sobic003G006300 Sobic003G006300 Sobic009G068500--Sobic003G006300 Sobic003G365300 Sobic003G365300 Sobic009G068500--Sobic003G365300 Sobic009G068500--Sobic002G359400 Sobic009G068500--Sobic010G020400 Sobic009G068500--Sobic010G251000 Sobic003G102400--Sobic001G451400 Sobic001G441400 Sobic001G441400 Sobic003G102400--Sobic001G441400 Sobic003G102400--Sobic006G200600 Sobic003G102400--Sobic004G353200 Sobic005G027400 Sobic005G027400 Sobic003G102400--Sobic005G027400 Sobic003G102400--Sobic002G359400 Sobic001G522600 Sobic001G522600 Sobic003G102400--Sobic001G522600 Sobic009G044800 Sobic009G044800 Sobic003G102400--Sobic009G044800 Sobic006G252900 Sobic006G252900 Sobic003G102400--Sobic006G252900
Octagon: transcription factors


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