Gene annotation
Transcriptome id Sobic.003G102400.1,Sobic.003G102400.7,Sobic.003G102400.5,Sobic.003G102400.9,Sobic.003G102400.14,Sobic.003G102400.10,Sobic.003G102400.2,Sobic.003G102400.4,Sobic.003G102400.3,Sobic.003G102400.6,Sobic.003G102400.8,Sobic.003G102400.11,Sobic.003G102400.13,Sobic.003G102400.12
Synonym Sb03g008580
Functional annotation expressed protein
UniProt A0A1W0VWL3 , A0A1W0VWM1 , A0A1W0VWJ6 , A0A1B6Q2H5 , A0A1W0VWK9 , A0A1W0VWM0 , A0A1W0VWN8 , A0A1B6Q2G5 , A0A1W0VWM3 , A0A1W0VWJ5 , C5XEZ2 , A0A1W0VWN4 , A0A1W0VWK4 , A0A1B6Q2G3
Pfam -
Panther DB PTHR31149 PTHR31149:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G08440 : -
RAP-DB (Rice) LOC_Os01g01800.2,LOC_Os01g01800.1 : expressed protein
MaizeGDB (Corn) Zm00025a023791
Brachypodium KQK02305 , KQK02308 , KQK02306 , KQK02307 , KQK08171 , KQK08172
Barley HORVU3Hr1G000260.24 , HORVU3Hr1G000260.25 , HORVU3Hr1G000260.20 , HORVU3Hr1G000260.21 , HORVU3Hr1G000260.22 , HORVU3Hr1G000260.23 , HORVU3Hr1G000260.11 , HORVU3Hr1G000260.10 , HORVU3Hr1G000260.13 , HORVU3Hr1G000260.12 , HORVU3Hr1G000260.15 , HORVU3Hr1G000260.14 , HORVU3Hr1G000260.17 , HORVU3Hr1G000260.16 , HORVU3Hr1G000260.18 , HORVU3Hr1G020260.1 , HORVU3Hr1G000260.5 , HORVU3Hr1G000260.4 , HORVU3Hr1G000260.7 , HORVU3Hr1G000260.6 , HORVU3Hr1G000260.1 , HORVU3Hr1G000260.3 , HORVU3Hr1G000260.2 , HORVU3Hr1G000260.9 , HORVU3Hr1G000260.8
Wheat TraesCS3A02G000900 , TraesCS3A02G000900 , TraesCS3A02G000900 , TraesCS1B02G001000 , TraesCS3D02G009600 , TraesCS3D02G009600 , TraesCS3D02G009600 , TraesCS1B02G001000 , TraesCS3B02G003100 , TraesCS3B02G003100 , TraesCS3B02G003100 , TraesCS3B02G003100 , TraesCS3B02G003100 , TraesCS3B02G003100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
2 Sobic.001G441400 transcription factor, putative, expressed K09060: plant G-box-binding factor
3 Sobic.006G200600 expressed protein -
4 Sobic.004G353200 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
5 Sobic.005G027400 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
6 Sobic.002G359400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
7 Sobic.001G522600 PHD-finger domain containing protein, putative, expressed -
8 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
9 Sobic.006G252900 ubiquitin family protein, putative, expressed -
10 Sobic.010G118950 - -
11 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
12 Sobic.004G178200 ligatin, putative, expressed K15027: translation initiation factor 2D
13 Sobic.007G075900 SKP1, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
14 Sobic.010G116600 FHA domain containing protein, putative, expressed -
15 Sobic.006G195700 WD domain, G-beta repeat domain containing protein, expressed K14962: WDR82, SWD2, COMPASS component SWD2
16 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
17 Sobic.004G140600 exonuclease, putative, expressed K13288: orn, REX2, oligoribonuclease
18 Sobic.007G183900 ubiquitin family protein, putative, expressed -
19 Sobic.008G046500 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
20 Sobic.003G118200 phosphoadenosine phosphosulfate, putative, expressed -


Gene co-expression network
sample Sobic003G102400 Sobic003G102400 Sobic001G451400 Sobic001G451400 Sobic003G102400--Sobic001G451400 Sobic001G441400 Sobic001G441400 Sobic003G102400--Sobic001G441400 Sobic006G200600 Sobic006G200600 Sobic003G102400--Sobic006G200600 Sobic004G353200 Sobic004G353200 Sobic003G102400--Sobic004G353200 Sobic005G027400 Sobic005G027400 Sobic003G102400--Sobic005G027400 Sobic002G359400 Sobic002G359400 Sobic003G102400--Sobic002G359400 Sobic001G522600 Sobic001G522600 Sobic003G102400--Sobic001G522600 Sobic009G044800 Sobic009G044800 Sobic003G102400--Sobic009G044800 Sobic006G252900 Sobic006G252900 Sobic003G102400--Sobic006G252900 Sobic007G008900 Sobic007G008900 Sobic001G451400--Sobic007G008900 Sobic009G165700 Sobic009G165700 Sobic001G451400--Sobic009G165700 Sobic001G451400--Sobic001G441400 Sobic001G389100 Sobic001G389100 Sobic001G451400--Sobic001G389100 Sobic010G247800 Sobic010G247800 Sobic001G451400--Sobic010G247800 Sobic003G404500 Sobic003G404500 Sobic001G451400--Sobic003G404500 Sobic010G226000 Sobic010G226000 Sobic001G451400--Sobic010G226000 Sobic001G451400--Sobic005G027400 Sobic003G422500 Sobic003G422500 Sobic001G451400--Sobic003G422500 Sobic001G441400--Sobic001G451400 Sobic001G441400--Sobic003G404500 Sobic001G441400--Sobic006G252900 Sobic001G441400--Sobic005G027400 Sobic001G441400--Sobic009G165700 Sobic001G363500 Sobic001G363500 Sobic001G441400--Sobic001G363500 Sobic001G441400--Sobic003G102400 Sobic002G299700 Sobic002G299700 Sobic001G441400--Sobic002G299700 Sobic004G351100 Sobic004G351100 Sobic001G441400--Sobic004G351100 Sobic006G200600--Sobic004G353200 Sobic001G281600 Sobic001G281600 Sobic006G200600--Sobic001G281600 Sobic004G121100 Sobic004G121100 Sobic006G200600--Sobic004G121100 Sobic001G392300 Sobic001G392300 Sobic006G200600--Sobic001G392300 Sobic010G251000 Sobic010G251000 Sobic006G200600--Sobic010G251000 Sobic008G047800 Sobic008G047800 Sobic006G200600--Sobic008G047800 Sobic009G205200 Sobic009G205200 Sobic006G200600--Sobic009G205200 Sobic007G078600 Sobic007G078600 Sobic006G200600--Sobic007G078600 Sobic003G248200 Sobic003G248200 Sobic006G200600--Sobic003G248200 Sobic004G353200--Sobic006G200600 Sobic004G353200--Sobic001G392300 Sobic007G075900 Sobic007G075900 Sobic004G353200--Sobic007G075900 Sobic001G007000 Sobic001G007000 Sobic004G353200--Sobic001G007000 Sobic004G066200 Sobic004G066200 Sobic004G353200--Sobic004G066200 Sobic004G353200--Sobic008G047800 Sobic004G274200 Sobic004G274200 Sobic004G353200--Sobic004G274200 Sobic010G053800 Sobic010G053800 Sobic004G353200--Sobic010G053800 Sobic004G353200--Sobic003G102400 Sobic002G309600 Sobic002G309600 Sobic005G027400--Sobic002G309600 Sobic004G065100 Sobic004G065100 Sobic005G027400--Sobic004G065100 Sobic005G027400--Sobic001G451400 Sobic009G132700 Sobic009G132700 Sobic005G027400--Sobic009G132700 Sobic007G117400 Sobic007G117400 Sobic005G027400--Sobic007G117400 Sobic001G219600 Sobic001G219600 Sobic005G027400--Sobic001G219600 Sobic001G289800 Sobic001G289800 Sobic005G027400--Sobic001G289800 Sobic005G027400--Sobic008G047800 Sobic004G006900 Sobic004G006900 Sobic005G027400--Sobic004G006900 Sobic002G359400--Sobic001G007000 Sobic002G359400--Sobic001G392300 Sobic010G262000 Sobic010G262000 Sobic002G359400--Sobic010G262000 Sobic006G041600 Sobic006G041600 Sobic002G359400--Sobic006G041600 Sobic008G004600 Sobic008G004600 Sobic002G359400--Sobic008G004600 Sobic002G305000 Sobic002G305000 Sobic002G359400--Sobic002G305000 Sobic002G325300 Sobic002G325300 Sobic002G359400--Sobic002G325300 Sobic006G103200 Sobic006G103200 Sobic002G359400--Sobic006G103200 Sobic002G359400--Sobic003G102400 Sobic007G061000 Sobic007G061000 Sobic001G522600--Sobic007G061000 Sobic001G522600--Sobic001G392300 Sobic008G002500 Sobic008G002500 Sobic001G522600--Sobic008G002500 Sobic010G236400 Sobic010G236400 Sobic001G522600--Sobic010G236400 Sobic009G095100 Sobic009G095100 Sobic001G522600--Sobic009G095100 Sobic008G014500 Sobic008G014500 Sobic001G522600--Sobic008G014500 Sobic006G200700 Sobic006G200700 Sobic001G522600--Sobic006G200700 Sobic001G522600--Sobic009G044800 Sobic007G183900 Sobic007G183900 Sobic001G522600--Sobic007G183900 Sobic003G360400 Sobic003G360400 Sobic009G044800--Sobic003G360400 Sobic003G352200 Sobic003G352200 Sobic009G044800--Sobic003G352200 Sobic001G227400 Sobic001G227400 Sobic009G044800--Sobic001G227400 Sobic002G045600 Sobic002G045600 Sobic009G044800--Sobic002G045600 Sobic010G116600 Sobic010G116600 Sobic009G044800--Sobic010G116600 Sobic007G218000 Sobic007G218000 Sobic009G044800--Sobic007G218000 Sobic001G025000 Sobic001G025000 Sobic009G044800--Sobic001G025000 Sobic001G433800 Sobic001G433800 Sobic009G044800--Sobic001G433800 Sobic009G044800--Sobic007G183900 Sobic006G252900--Sobic001G433800 Sobic006G252900--Sobic006G041600 Sobic006G252900--Sobic001G363500 Sobic006G252900--Sobic001G441400 Sobic009G256400 Sobic009G256400 Sobic006G252900--Sobic009G256400 Sobic006G096900 Sobic006G096900 Sobic006G252900--Sobic006G096900 Sobic005G112300 Sobic005G112300 Sobic006G252900--Sobic005G112300 Sobic006G252900--Sobic005G027400 Sobic009G177500 Sobic009G177500 Sobic006G252900--Sobic009G177500
Octagon: transcription factors


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