Gene annotation
Transcriptome id Sobic.006G163800.1
Synonym Sb06g023990, LCBK1, ATLCBK1
Functional annotation diacylglycerol kinase, putative, expressed
UniProt A0A1Z5RE76
Pfam PF00781
Panther DB PTHR12358 PTHR12358:SF39
NCBI CDD KOG1116; Sphingosine kinase, involved in sphingolipid metabolism
KEGG Orthology -
Gene Ontology GO:0016301; kinase activity


Orthologs (automatic annotation)
TAIR AT5G23450 : long-chain base (LCB) kinase 1
RAP-DB (Rice) LOC_Os04g45800.1 : diacylglycerol kinase, putative, expressed
MaizeGDB (Corn) Zm00025a006299 , Zm00025a031668 , Zm00025a056625 , Zm00025a026861
Brachypodium KQJ83855
Barley HORVU2Hr1G092690.12 , HORVU2Hr1G092690.1 , HORVU2Hr1G092690.6 , HORVU2Hr1G092690.7 , HORVU2Hr1G092690.4 , HORVU2Hr1G092690.5 , HORVU2Hr1G092690.8 , HORVU2Hr1G092690.9 , HORVU2Hr1G092690.2 , HORVU2Hr1G092690.3 , HORVU2Hr1G092690.18 , HORVU2Hr1G092690.19 , HORVU2Hr1G092690.10 , HORVU2Hr1G092690.11 , HORVU2Hr1G092690.13 , HORVU2Hr1G092690.14 , HORVU2Hr1G092690.15 , HORVU2Hr1G092690.16 , HORVU2Hr1G092690.17 , HORVU2Hr1G092690.21 , HORVU2Hr1G092690.20 , HORVU2Hr1G092690.22
Wheat TraesCS2B02G407500 , TraesCS2A02G389300 , TraesCS2A02G389300 , TraesCS2D02G387200 , TraesCS2B02G407500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G204400 phox domain-containing protein, putative, expressed -
2 Sobic.001G369000 adapitin protein, putative, expressed K12392: AP-1 complex subunit beta-1
3 Sobic.006G131000 expressed protein K11968: ariadne-1
4 Sobic.010G053800 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
5 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
6 Sobic.010G275500 EF hand family protein, putative, expressed -
7 Sobic.006G012500 protein transport protein Sec24-like, putative, expressed K14007: protein transport protein SEC24
8 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
9 Sobic.004G146500 ataxin-2 related protein, putative, expressed -
10 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
11 Sobic.001G155000 DNA-directed RNA polymerase II subunit RPB2, putative, expressed K03010: RPB2, DNA-directed RNA polymerase II subunit RPB2
12 Sobic.007G132100 myrosinase precursor, putative, expressed -
13 Sobic.003G404500 dynamin family protein, putative, expressed K17065: dynamin 1-like protein
14 Sobic.003G187500 ATP-binding region, ATPase-like domain containing protein, expressed -
15 Sobic.006G195700 WD domain, G-beta repeat domain containing protein, expressed K14962: WDR82, SWD2, COMPASS component SWD2
16 Sobic.009G049400 "SRS3(Ortholog in rice:Kitagawa et al., 2010)"(PubMedID : 31659920)@ATKINESIN-13A/KINESIN-13A, putative, expressed K10393: KIF2_24, kinesin family member 2/24
17 Sobic.003G187200 phox domain-containing protein, putative, expressed -
18 Sobic.009G229600 tRNA-binding arm, putative, expressed -
19 Sobic.010G116600 FHA domain containing protein, putative, expressed -
20 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1


Gene co-expression network
sample Sobic006G163800 Sobic006G163800 Sobic010G204400 Sobic010G204400 Sobic006G163800--Sobic010G204400 Sobic001G369000 Sobic001G369000 Sobic006G163800--Sobic001G369000 Sobic006G131000 Sobic006G131000 Sobic006G163800--Sobic006G131000 Sobic010G053800 Sobic010G053800 Sobic006G163800--Sobic010G053800 Sobic007G218000 Sobic007G218000 Sobic006G163800--Sobic007G218000 Sobic010G275500 Sobic010G275500 Sobic006G163800--Sobic010G275500 Sobic006G012500 Sobic006G012500 Sobic006G163800--Sobic006G012500 Sobic004G039600 Sobic004G039600 Sobic006G163800--Sobic004G039600 Sobic004G146500 Sobic004G146500 Sobic006G163800--Sobic004G146500 Sobic010G204400--Sobic006G163800 Sobic006G195700 Sobic006G195700 Sobic010G204400--Sobic006G195700 Sobic010G204400--Sobic007G218000 Sobic008G153000 Sobic008G153000 Sobic010G204400--Sobic008G153000 Sobic010G236400 Sobic010G236400 Sobic010G204400--Sobic010G236400 Sobic007G132100 Sobic007G132100 Sobic010G204400--Sobic007G132100 Sobic003G416700 Sobic003G416700 Sobic010G204400--Sobic003G416700 Sobic010G204400--Sobic006G131000 Sobic010G116600 Sobic010G116600 Sobic010G204400--Sobic010G116600 Sobic001G369000--Sobic004G039600 Sobic001G335900 Sobic001G335900 Sobic001G369000--Sobic001G335900 Sobic007G120500 Sobic007G120500 Sobic001G369000--Sobic007G120500 Sobic003G240700 Sobic003G240700 Sobic001G369000--Sobic003G240700 Sobic001G369000--Sobic006G163800 Sobic006G138000 Sobic006G138000 Sobic001G369000--Sobic006G138000 Sobic009G049400 Sobic009G049400 Sobic001G369000--Sobic009G049400 Sobic001G426600 Sobic001G426600 Sobic001G369000--Sobic001G426600 Sobic009G229600 Sobic009G229600 Sobic001G369000--Sobic009G229600 Sobic006G131000--Sobic007G218000 Sobic006G131000--Sobic007G132100 Sobic006G131000--Sobic006G163800 Sobic006G131000--Sobic004G039600 Sobic001G096000 Sobic001G096000 Sobic006G131000--Sobic001G096000 Sobic006G174850 Sobic006G174850 Sobic006G131000--Sobic006G174850 Sobic006G131000--Sobic010G275500 Sobic006G131000--Sobic001G369000 Sobic004G178200 Sobic004G178200 Sobic006G131000--Sobic004G178200 Sobic010G053800--Sobic006G012500 Sobic010G053800--Sobic010G275500 Sobic004G072100 Sobic004G072100 Sobic010G053800--Sobic004G072100 Sobic001G155000 Sobic001G155000 Sobic010G053800--Sobic001G155000 Sobic003G187500 Sobic003G187500 Sobic010G053800--Sobic003G187500 Sobic008G047800 Sobic008G047800 Sobic010G053800--Sobic008G047800 Sobic010G053800--Sobic010G116600 Sobic010G053800--Sobic006G163800 Sobic010G053800--Sobic004G039600 Sobic007G218000--Sobic007G132100 Sobic007G218000--Sobic004G072100 Sobic002G112700 Sobic002G112700 Sobic007G218000--Sobic002G112700 Sobic007G218000--Sobic006G131000 Sobic009G044800 Sobic009G044800 Sobic007G218000--Sobic009G044800 Sobic007G218000--Sobic010G204400 Sobic007G218000--Sobic006G012500 Sobic009G249700 Sobic009G249700 Sobic007G218000--Sobic009G249700 Sobic009G092400 Sobic009G092400 Sobic007G218000--Sobic009G092400 Sobic010G275500--Sobic010G053800 Sobic010G275500--Sobic004G072100 Sobic010G275500--Sobic006G012500 Sobic010G275500--Sobic001G155000 Sobic010G275500--Sobic010G116600 Sobic010G069100 Sobic010G069100 Sobic010G275500--Sobic010G069100 Sobic009G119000 Sobic009G119000 Sobic010G275500--Sobic009G119000 Sobic007G183900 Sobic007G183900 Sobic010G275500--Sobic007G183900 Sobic002G397500 Sobic002G397500 Sobic010G275500--Sobic002G397500 Sobic006G012500--Sobic004G039600 Sobic006G012500--Sobic010G053800 Sobic008G099800 Sobic008G099800 Sobic006G012500--Sobic008G099800 Sobic006G012500--Sobic010G275500 Sobic006G012500--Sobic004G072100 Sobic001G534800 Sobic001G534800 Sobic006G012500--Sobic001G534800 Sobic001G065000 Sobic001G065000 Sobic006G012500--Sobic001G065000 Sobic006G012500--Sobic007G132100 Sobic006G012500--Sobic007G218000 Sobic004G039600--Sobic006G012500 Sobic004G039600--Sobic001G369000 Sobic004G039600--Sobic007G132100 Sobic004G039600--Sobic008G099800 Sobic006G126100 Sobic006G126100 Sobic004G039600--Sobic006G126100 Sobic004G039600--Sobic010G053800 Sobic004G039600--Sobic006G131000 Sobic004G039600--Sobic001G534800 Sobic004G039600--Sobic007G120500 Sobic001G109800 Sobic001G109800 Sobic004G146500--Sobic001G109800 Sobic004G146500--Sobic010G069100 Sobic002G297200 Sobic002G297200 Sobic004G146500--Sobic002G297200 Sobic007G119200 Sobic007G119200 Sobic004G146500--Sobic007G119200 Sobic004G274200 Sobic004G274200 Sobic004G146500--Sobic004G274200 Sobic001G220300 Sobic001G220300 Sobic004G146500--Sobic001G220300 Sobic004G146500--Sobic001G155000 Sobic002G034600 Sobic002G034600 Sobic004G146500--Sobic002G034600 Sobic004G146500--Sobic008G047800
Octagon: transcription factors


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