Gene annotation
Transcriptome id Sobic.006G131000.2,Sobic.006G131000.1
Synonym ATARI8, Sb06g021080, ARI8
Functional annotation expressed protein
UniProt C5YBD5 , A0A1Z5RDL7
Pfam PF01485
Panther DB PTHR11685 PTHR11685:SF135 PTHR11685 PTHR11685:SF154
NCBI CDD KOG1815; Predicted E3 ubiquitin ligase
KEGG Orthology K11968; ariadne-1
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT2G31510 : IBR domain-containing protein
RAP-DB (Rice) LOC_Os04g41470.1 : expressed protein
MaizeGDB (Corn) Zm00025a010894 , Zm00025a056367
Brachypodium PNT61366 , KQK00241 , KQK00240 , KQJ83333 , KQJ83332
Barley HORVU0Hr1G015890.7 , HORVU0Hr1G015890.6 , HORVU0Hr1G015890.5 , HORVU0Hr1G015890.4 , HORVU0Hr1G015890.3 , HORVU0Hr1G015890.2 , HORVU0Hr1G015890.1 , HORVU0Hr1G015890.9 , HORVU0Hr1G015890.8 , HORVU6Hr1G055260.2 , HORVU6Hr1G055260.3 , HORVU6Hr1G055260.1 , HORVU6Hr1G055260.6 , HORVU6Hr1G055260.7 , HORVU6Hr1G055260.4 , HORVU6Hr1G055260.5 , HORVU6Hr1G055260.8 , HORVU6Hr1G055260.9 , HORVU2Hr1G085060.5 , HORVU2Hr1G085060.4 , HORVU2Hr1G085060.7 , HORVU2Hr1G085060.6 , HORVU2Hr1G085060.1 , HORVU2Hr1G085060.3 , HORVU2Hr1G085060.2 , HORVU2Hr1G085060.9 , HORVU2Hr1G085060.8 , HORVU2Hr1G085100.1 , HORVU6Hr1G055260.10 , HORVU6Hr1G055260.11 , HORVU6Hr1G055260.12 , HORVU6Hr1G055260.13 , HORVU0Hr1G015890.10
Wheat TraesCS2B02G368000 , TraesCS2B02G368000 , TraesCS2D02G348000 , TraesCS2D02G348000 , TraesCS2D02G348000 , TraesCS6D02G198600 , TraesCS6D02G198600 , TraesCS6D02G198600 , TraesCS6D02G198600 , TraesCS6D02G198600 , TraesCS6B02G245900 , TraesCS6B02G245900 , TraesCS2B02G368000 , TraesCS6A02G216900 , TraesCS6A02G216900 , TraesCS6A02G216900 , TraesCS2A02G349600 , TraesCS2A02G349600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
2 Sobic.007G132100 myrosinase precursor, putative, expressed -
3 Sobic.006G163800 diacylglycerol kinase, putative, expressed -
4 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
5 Sobic.001G096000 CWF19-like 2, cell cycle control, putative, expressed -
6 Sobic.006G174850 - K15193: SPTY2D1, protein SPT2
7 Sobic.010G275500 EF hand family protein, putative, expressed -
8 Sobic.001G369000 adapitin protein, putative, expressed K12392: AP-1 complex subunit beta-1
9 Sobic.004G178200 ligatin, putative, expressed K15027: translation initiation factor 2D
10 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
11 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
12 Sobic.010G204400 phox domain-containing protein, putative, expressed -
13 Sobic.001G281100 START domain containing protein, expressed -
14 Sobic.004G344901 - K10357: myosin V
15 Sobic.007G093800 expressed protein -
16 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
17 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
18 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
19 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
20 Sobic.006G012500 protein transport protein Sec24-like, putative, expressed K14007: protein transport protein SEC24


Gene co-expression network
sample Sobic006G131000 Sobic006G131000 Sobic007G218000 Sobic007G218000 Sobic006G131000--Sobic007G218000 Sobic007G132100 Sobic007G132100 Sobic006G131000--Sobic007G132100 Sobic006G163800 Sobic006G163800 Sobic006G131000--Sobic006G163800 Sobic004G039600 Sobic004G039600 Sobic006G131000--Sobic004G039600 Sobic001G096000 Sobic001G096000 Sobic006G131000--Sobic001G096000 Sobic006G174850 Sobic006G174850 Sobic006G131000--Sobic006G174850 Sobic010G275500 Sobic010G275500 Sobic006G131000--Sobic010G275500 Sobic001G369000 Sobic001G369000 Sobic006G131000--Sobic001G369000 Sobic004G178200 Sobic004G178200 Sobic006G131000--Sobic004G178200 Sobic007G218000--Sobic007G132100 Sobic004G072100 Sobic004G072100 Sobic007G218000--Sobic004G072100 Sobic002G112700 Sobic002G112700 Sobic007G218000--Sobic002G112700 Sobic007G218000--Sobic006G131000 Sobic009G044800 Sobic009G044800 Sobic007G218000--Sobic009G044800 Sobic010G204400 Sobic010G204400 Sobic007G218000--Sobic010G204400 Sobic006G012500 Sobic006G012500 Sobic007G218000--Sobic006G012500 Sobic009G249700 Sobic009G249700 Sobic007G218000--Sobic009G249700 Sobic009G092400 Sobic009G092400 Sobic007G218000--Sobic009G092400 Sobic007G132100--Sobic007G218000 Sobic007G132100--Sobic004G072100 Sobic007G132100--Sobic004G039600 Sobic007G132100--Sobic004G178200 Sobic007G132100--Sobic006G131000 Sobic007G132100--Sobic006G012500 Sobic007G132100--Sobic009G044800 Sobic008G099800 Sobic008G099800 Sobic007G132100--Sobic008G099800 Sobic007G132100--Sobic010G204400 Sobic006G163800--Sobic010G204400 Sobic006G163800--Sobic001G369000 Sobic006G163800--Sobic006G131000 Sobic010G053800 Sobic010G053800 Sobic006G163800--Sobic010G053800 Sobic006G163800--Sobic007G218000 Sobic006G163800--Sobic010G275500 Sobic006G163800--Sobic006G012500 Sobic006G163800--Sobic004G039600 Sobic004G146500 Sobic004G146500 Sobic006G163800--Sobic004G146500 Sobic004G039600--Sobic006G012500 Sobic004G039600--Sobic001G369000 Sobic004G039600--Sobic007G132100 Sobic004G039600--Sobic008G099800 Sobic006G126100 Sobic006G126100 Sobic004G039600--Sobic006G126100 Sobic004G039600--Sobic010G053800 Sobic004G039600--Sobic006G131000 Sobic001G534800 Sobic001G534800 Sobic004G039600--Sobic001G534800 Sobic007G120500 Sobic007G120500 Sobic004G039600--Sobic007G120500 Sobic001G096000--Sobic006G131000 Sobic008G124900 Sobic008G124900 Sobic001G096000--Sobic008G124900 Sobic001G096000--Sobic006G126100 Sobic003G332500 Sobic003G332500 Sobic001G096000--Sobic003G332500 Sobic003G104000 Sobic003G104000 Sobic001G096000--Sobic003G104000 Sobic003G337300 Sobic003G337300 Sobic001G096000--Sobic003G337300 Sobic001G477700 Sobic001G477700 Sobic001G096000--Sobic001G477700 Sobic001G163400 Sobic001G163400 Sobic001G096000--Sobic001G163400 Sobic001G362200 Sobic001G362200 Sobic001G096000--Sobic001G362200 Sobic006G174850--Sobic007G218000 Sobic006G174850--Sobic006G131000 Sobic006G174850--Sobic009G044800 Sobic001G273700 Sobic001G273700 Sobic006G174850--Sobic001G273700 Sobic003G379200 Sobic003G379200 Sobic006G174850--Sobic003G379200 Sobic005G062200 Sobic005G062200 Sobic006G174850--Sobic005G062200 Sobic001G263600 Sobic001G263600 Sobic006G174850--Sobic001G263600 Sobic006G174850--Sobic007G132100 Sobic006G240100 Sobic006G240100 Sobic006G174850--Sobic006G240100 Sobic010G275500--Sobic010G053800 Sobic010G275500--Sobic004G072100 Sobic010G275500--Sobic006G012500 Sobic001G155000 Sobic001G155000 Sobic010G275500--Sobic001G155000 Sobic010G116600 Sobic010G116600 Sobic010G275500--Sobic010G116600 Sobic010G069100 Sobic010G069100 Sobic010G275500--Sobic010G069100 Sobic009G119000 Sobic009G119000 Sobic010G275500--Sobic009G119000 Sobic007G183900 Sobic007G183900 Sobic010G275500--Sobic007G183900 Sobic002G397500 Sobic002G397500 Sobic010G275500--Sobic002G397500 Sobic001G369000--Sobic004G039600 Sobic001G335900 Sobic001G335900 Sobic001G369000--Sobic001G335900 Sobic001G369000--Sobic007G120500 Sobic003G240700 Sobic003G240700 Sobic001G369000--Sobic003G240700 Sobic001G369000--Sobic006G163800 Sobic006G138000 Sobic006G138000 Sobic001G369000--Sobic006G138000 Sobic009G049400 Sobic009G049400 Sobic001G369000--Sobic009G049400 Sobic001G426600 Sobic001G426600 Sobic001G369000--Sobic001G426600 Sobic009G229600 Sobic009G229600 Sobic001G369000--Sobic009G229600 Sobic004G178200--Sobic007G132100 Sobic004G178200--Sobic007G218000 Sobic006G136400 Sobic006G136400 Sobic004G178200--Sobic006G136400 Sobic004G178200--Sobic006G131000 Sobic004G178200--Sobic006G126100 Sobic004G178200--Sobic006G012500 Sobic004G178200--Sobic010G116600 Sobic002G303600 Sobic002G303600 Sobic004G178200--Sobic002G303600 Sobic004G178200--Sobic004G039600
Octagon: transcription factors


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