Gene annotation
Transcriptome id Sobic.003G337300.1
Synonym Sb03g038150
Functional annotation HEAT repeat family protein, putative, expressed
UniProt C5XN97
Pfam PF00069
Panther DB PTHR12984 PTHR12984:SF3
NCBI CDD -
KEGG Orthology K08876; SCY1-like protein 1
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G40730 : Protein kinase family protein with ARM repeat domain
RAP-DB (Rice) LOC_Os01g60440.1 : HEAT repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a027065 , Zm00025a039770
Brachypodium KQK11900 , KQK10341
Barley HORVU3Hr1G080820.3 , HORVU3Hr1G080820.2 , HORVU3Hr1G080820.1 , HORVU3Hr1G080820.6 , HORVU3Hr1G080820.5 , HORVU3Hr1G080820.4
Wheat TraesCS3D02G336800 , TraesCS3A02G342800 , TraesCS3B02G375000
Populus PNT07511 , PNT07510 , PNT07509


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cDNA sequences
Sobic.003G337300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
2 Sobic.010G004100 expressed protein -
3 Sobic.002G137400 protein binding protein, putative, expressed -
4 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
5 Sobic.006G131000 expressed protein K11968: ariadne-1
6 Sobic.004G344901 - K10357: myosin V
7 Sobic.004G322400 WD40-like, putative, expressed -
8 Sobic.003G332500 EAP30/Vps36 family domain containing protein, expressed K12190: VPS36, ESCRT-II complex subunit VPS36
9 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
10 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
11 Sobic.006G012500 protein transport protein Sec24-like, putative, expressed K14007: protein transport protein SEC24
12 Sobic.006G280000 transportin-2, putative, expressed K18752: TNPO1, IPO2, transportin-1
13 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
14 Sobic.002G299000 ribonuclease 2-5A family protein, expressed -
15 Sobic.007G225100 ZOS8-09 - C2H2 zinc finger protein, expressed -
16 Sobic.004G004300 expressed protein -
17 Sobic.010G275500 EF hand family protein, putative, expressed -
18 Sobic.008G099800 expressed protein -
19 Sobic.002G020700 WD domain, G-beta repeat domain containing protein, expressed K14018: PLAA, DOA1, phospholipase A-2-activating protein
20 Sobic.001G251100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6


Gene co-expression network
sample Sobic003G337300 Sobic003G337300 Sobic003G104000 Sobic003G104000 Sobic003G337300--Sobic003G104000 Sobic010G004100 Sobic010G004100 Sobic003G337300--Sobic010G004100 Sobic002G137400 Sobic002G137400 Sobic003G337300--Sobic002G137400 Sobic004G039600 Sobic004G039600 Sobic003G337300--Sobic004G039600 Sobic006G131000 Sobic006G131000 Sobic003G337300--Sobic006G131000 Sobic004G344901 Sobic004G344901 Sobic003G337300--Sobic004G344901 Sobic004G322400 Sobic004G322400 Sobic003G337300--Sobic004G322400 Sobic003G332500 Sobic003G332500 Sobic003G337300--Sobic003G332500 Sobic001G415300 Sobic001G415300 Sobic003G337300--Sobic001G415300 Sobic003G104000--Sobic003G337300 Sobic002G256700 Sobic002G256700 Sobic003G104000--Sobic002G256700 Sobic006G126100 Sobic006G126100 Sobic003G104000--Sobic006G126100 Sobic001G251100 Sobic001G251100 Sobic003G104000--Sobic001G251100 Sobic002G142900 Sobic002G142900 Sobic003G104000--Sobic002G142900 Sobic002G295500 Sobic002G295500 Sobic003G104000--Sobic002G295500 Sobic004G277200 Sobic004G277200 Sobic003G104000--Sobic004G277200 Sobic004G131300 Sobic004G131300 Sobic003G104000--Sobic004G131300 Sobic006G261400 Sobic006G261400 Sobic003G104000--Sobic006G261400 Sobic007G163100 Sobic007G163100 Sobic010G004100--Sobic007G163100 Sobic001G117200 Sobic001G117200 Sobic010G004100--Sobic001G117200 Sobic010G004100--Sobic002G137400 Sobic010G004100--Sobic003G337300 Sobic010G004100--Sobic003G104000 Sobic004G113400 Sobic004G113400 Sobic010G004100--Sobic004G113400 Sobic003G408600 Sobic003G408600 Sobic010G004100--Sobic003G408600 Sobic004G004300 Sobic004G004300 Sobic010G004100--Sobic004G004300 Sobic010G004100--Sobic001G415300 Sobic002G137400--Sobic001G415300 Sobic004G002100 Sobic004G002100 Sobic002G137400--Sobic004G002100 Sobic002G137400--Sobic010G004100 Sobic002G137400--Sobic003G337300 Sobic003G331400 Sobic003G331400 Sobic002G137400--Sobic003G331400 Sobic001G281100 Sobic001G281100 Sobic002G137400--Sobic001G281100 Sobic002G137400--Sobic004G004300 Sobic001G534800 Sobic001G534800 Sobic002G137400--Sobic001G534800 Sobic002G031100 Sobic002G031100 Sobic002G137400--Sobic002G031100 Sobic006G012500 Sobic006G012500 Sobic004G039600--Sobic006G012500 Sobic001G369000 Sobic001G369000 Sobic004G039600--Sobic001G369000 Sobic007G132100 Sobic007G132100 Sobic004G039600--Sobic007G132100 Sobic008G099800 Sobic008G099800 Sobic004G039600--Sobic008G099800 Sobic004G039600--Sobic006G126100 Sobic010G053800 Sobic010G053800 Sobic004G039600--Sobic010G053800 Sobic004G039600--Sobic006G131000 Sobic004G039600--Sobic001G534800 Sobic007G120500 Sobic007G120500 Sobic004G039600--Sobic007G120500 Sobic007G218000 Sobic007G218000 Sobic006G131000--Sobic007G218000 Sobic006G131000--Sobic007G132100 Sobic006G163800 Sobic006G163800 Sobic006G131000--Sobic006G163800 Sobic006G131000--Sobic004G039600 Sobic001G096000 Sobic001G096000 Sobic006G131000--Sobic001G096000 Sobic006G174850 Sobic006G174850 Sobic006G131000--Sobic006G174850 Sobic010G275500 Sobic010G275500 Sobic006G131000--Sobic010G275500 Sobic006G131000--Sobic001G369000 Sobic004G178200 Sobic004G178200 Sobic006G131000--Sobic004G178200 Sobic004G344901--Sobic003G331400 Sobic004G344901--Sobic003G337300 Sobic001G163400 Sobic001G163400 Sobic004G344901--Sobic001G163400 Sobic004G344901--Sobic006G131000 Sobic004G344901--Sobic004G004300 Sobic004G344901--Sobic001G415300 Sobic008G003700 Sobic008G003700 Sobic004G344901--Sobic008G003700 Sobic004G344901--Sobic001G281100 Sobic004G344901--Sobic002G137400 Sobic002G401500 Sobic002G401500 Sobic004G322400--Sobic002G401500 Sobic002G042600 Sobic002G042600 Sobic004G322400--Sobic002G042600 Sobic009G131300 Sobic009G131300 Sobic004G322400--Sobic009G131300 Sobic010G223100 Sobic010G223100 Sobic004G322400--Sobic010G223100 Sobic008G124800 Sobic008G124800 Sobic004G322400--Sobic008G124800 Sobic002G179400 Sobic002G179400 Sobic004G322400--Sobic002G179400 Sobic010G059500 Sobic010G059500 Sobic004G322400--Sobic010G059500 Sobic001G065100 Sobic001G065100 Sobic004G322400--Sobic001G065100 Sobic004G322400--Sobic010G275500 Sobic003G332500--Sobic003G337300 Sobic003G332500--Sobic004G277200 Sobic003G332500--Sobic003G104000 Sobic003G332500--Sobic006G126100 Sobic001G362200 Sobic001G362200 Sobic003G332500--Sobic001G362200 Sobic003G332500--Sobic007G132100 Sobic004G072100 Sobic004G072100 Sobic003G332500--Sobic004G072100 Sobic003G332500--Sobic001G096000 Sobic003G332500--Sobic010G004100 Sobic001G415300--Sobic002G137400 Sobic001G415300--Sobic004G004300 Sobic001G415300--Sobic001G281100 Sobic001G085300 Sobic001G085300 Sobic001G415300--Sobic001G085300 Sobic001G415300--Sobic003G337300 Sobic001G415300--Sobic006G126100 Sobic001G415300--Sobic001G534800 Sobic001G415300--Sobic004G002100 Sobic001G457900 Sobic001G457900 Sobic001G415300--Sobic001G457900
Octagon: transcription factors


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