Gene annotation
Transcriptome id Sobic.002G299000.1
Synonym IRE1A, IRE1-2, Sb02g032960, ATIRE1-2
Functional annotation ribonuclease 2-5A family protein, expressed
UniProt C5X8G2
Pfam PF07714 PF06479
Panther DB PTHR13954 PTHR13954:SF6
NCBI CDD KOG0198; MEKK and related serine/threonine protein kinases
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006397mRNA processing GO:0004540ribonuclease activity


Orthologs (automatic annotation)
TAIR AT2G17520 : Endoribonuclease/protein kinase IRE1-like
RAP-DB (Rice) LOC_Os07g28820.1 : ribonuclease 2-5A family protein, expressed
MaizeGDB (Corn) Zm00025a014593 , Zm00025a047846
Brachypodium KQK16335
Barley HORVU0Hr1G017510.1 , HORVU0Hr1G017510.2 , HORVU0Hr1G017510.3 , HORVU0Hr1G017510.4 , HORVU0Hr1G017510.5
Wheat TraesCS6B02G412400 , TraesCS6A02G374700 , TraesCS6D02G358600
Populus PNT27352


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cDNA sequences
Sobic.002G299000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G382600 expressed protein -
2 Sobic.007G225100 ZOS8-09 - C2H2 zinc finger protein, expressed -
3 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
4 Sobic.001G124200 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
5 Sobic.008G112800 pre-mRNA-processing factor 6, putative, expressed K12855: PRPF6, pre-mRNA-processing factor 6
6 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
7 Sobic.008G089100 armadillo/beta-catenin repeat family protein, putative, expressed -
8 Sobic.007G132100 myrosinase precursor, putative, expressed -
9 Sobic.006G131000 expressed protein K11968: ariadne-1
10 Sobic.001G313700 expressed protein -
11 Sobic.004G257100 transmembrane 9 superfamily member, putative, expressed -
12 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
13 Sobic.004G092500 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
14 Sobic.001G420800 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
15 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
16 Sobic.007G093800 expressed protein -
17 Sobic.002G020700 WD domain, G-beta repeat domain containing protein, expressed K14018: PLAA, DOA1, phospholipase A-2-activating protein
18 Sobic.001G163400 roothairless 1, putative, expressed -
19 Sobic.003G164200 cullin, putative, expressed K03347: CUL1, cullin 1
20 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'


Gene co-expression network
sample Sobic002G299000 Sobic002G299000 Sobic001G382600 Sobic001G382600 Sobic002G299000--Sobic001G382600 Sobic007G225100 Sobic007G225100 Sobic002G299000--Sobic007G225100 Sobic003G337300 Sobic003G337300 Sobic002G299000--Sobic003G337300 Sobic001G124200 Sobic001G124200 Sobic002G299000--Sobic001G124200 Sobic008G112800 Sobic008G112800 Sobic002G299000--Sobic008G112800 Sobic004G039600 Sobic004G039600 Sobic002G299000--Sobic004G039600 Sobic008G089100 Sobic008G089100 Sobic002G299000--Sobic008G089100 Sobic007G132100 Sobic007G132100 Sobic002G299000--Sobic007G132100 Sobic006G131000 Sobic006G131000 Sobic002G299000--Sobic006G131000 Sobic001G382600--Sobic002G299000 Sobic002G008800 Sobic002G008800 Sobic001G382600--Sobic002G008800 Sobic001G065100 Sobic001G065100 Sobic001G382600--Sobic001G065100 Sobic001G118200 Sobic001G118200 Sobic001G382600--Sobic001G118200 Sobic002G111600 Sobic002G111600 Sobic001G382600--Sobic002G111600 Sobic001G382600--Sobic003G337300 Sobic002G020700 Sobic002G020700 Sobic001G382600--Sobic002G020700 Sobic008G055900 Sobic008G055900 Sobic001G382600--Sobic008G055900 Sobic001G382600--Sobic006G131000 Sobic004G277200 Sobic004G277200 Sobic007G225100--Sobic004G277200 Sobic001G313700 Sobic001G313700 Sobic007G225100--Sobic001G313700 Sobic007G225100--Sobic002G299000 Sobic007G225100--Sobic003G337300 Sobic002G366400 Sobic002G366400 Sobic007G225100--Sobic002G366400 Sobic003G104000 Sobic003G104000 Sobic007G225100--Sobic003G104000 Sobic008G099800 Sobic008G099800 Sobic007G225100--Sobic008G099800 Sobic007G225100--Sobic001G124200 Sobic002G045600 Sobic002G045600 Sobic007G225100--Sobic002G045600 Sobic003G337300--Sobic003G104000 Sobic010G004100 Sobic010G004100 Sobic003G337300--Sobic010G004100 Sobic002G137400 Sobic002G137400 Sobic003G337300--Sobic002G137400 Sobic003G337300--Sobic004G039600 Sobic003G337300--Sobic006G131000 Sobic004G344901 Sobic004G344901 Sobic003G337300--Sobic004G344901 Sobic004G322400 Sobic004G322400 Sobic003G337300--Sobic004G322400 Sobic003G332500 Sobic003G332500 Sobic003G337300--Sobic003G332500 Sobic001G415300 Sobic001G415300 Sobic003G337300--Sobic001G415300 Sobic010G205800 Sobic010G205800 Sobic001G124200--Sobic010G205800 Sobic010G020300 Sobic010G020300 Sobic001G124200--Sobic010G020300 Sobic003G155900 Sobic003G155900 Sobic001G124200--Sobic003G155900 Sobic001G124200--Sobic004G039600 Sobic010G278200 Sobic010G278200 Sobic001G124200--Sobic010G278200 Sobic001G124200--Sobic007G132100 Sobic009G138100 Sobic009G138100 Sobic001G124200--Sobic009G138100 Sobic001G390800 Sobic001G390800 Sobic001G124200--Sobic001G390800 Sobic009G228700 Sobic009G228700 Sobic001G124200--Sobic009G228700 Sobic004G274200 Sobic004G274200 Sobic008G112800--Sobic004G274200 Sobic010G236400 Sobic010G236400 Sobic008G112800--Sobic010G236400 Sobic001G392300 Sobic001G392300 Sobic008G112800--Sobic001G392300 Sobic002G126500 Sobic002G126500 Sobic008G112800--Sobic002G126500 Sobic009G044800 Sobic009G044800 Sobic008G112800--Sobic009G044800 Sobic008G112800--Sobic007G132100 Sobic004G257100 Sobic004G257100 Sobic008G112800--Sobic004G257100 Sobic008G179700 Sobic008G179700 Sobic008G112800--Sobic008G179700 Sobic008G112800--Sobic001G124200 Sobic006G012500 Sobic006G012500 Sobic004G039600--Sobic006G012500 Sobic001G369000 Sobic001G369000 Sobic004G039600--Sobic001G369000 Sobic004G039600--Sobic007G132100 Sobic004G039600--Sobic008G099800 Sobic006G126100 Sobic006G126100 Sobic004G039600--Sobic006G126100 Sobic010G053800 Sobic010G053800 Sobic004G039600--Sobic010G053800 Sobic004G039600--Sobic006G131000 Sobic001G534800 Sobic001G534800 Sobic004G039600--Sobic001G534800 Sobic007G120500 Sobic007G120500 Sobic004G039600--Sobic007G120500 Sobic008G089100--Sobic002G045600 Sobic001G207000 Sobic001G207000 Sobic008G089100--Sobic001G207000 Sobic008G089100--Sobic001G392300 Sobic003G408600 Sobic003G408600 Sobic008G089100--Sobic003G408600 Sobic003G313500 Sobic003G313500 Sobic008G089100--Sobic003G313500 Sobic001G194200 Sobic001G194200 Sobic008G089100--Sobic001G194200 Sobic008G089100--Sobic001G390800 Sobic004G135400 Sobic004G135400 Sobic008G089100--Sobic004G135400 Sobic003G164200 Sobic003G164200 Sobic008G089100--Sobic003G164200 Sobic007G218000 Sobic007G218000 Sobic007G132100--Sobic007G218000 Sobic004G072100 Sobic004G072100 Sobic007G132100--Sobic004G072100 Sobic007G132100--Sobic004G039600 Sobic004G178200 Sobic004G178200 Sobic007G132100--Sobic004G178200 Sobic007G132100--Sobic006G131000 Sobic007G132100--Sobic006G012500 Sobic007G132100--Sobic009G044800 Sobic007G132100--Sobic008G099800 Sobic010G204400 Sobic010G204400 Sobic007G132100--Sobic010G204400 Sobic006G131000--Sobic007G218000 Sobic006G131000--Sobic007G132100 Sobic006G163800 Sobic006G163800 Sobic006G131000--Sobic006G163800 Sobic006G131000--Sobic004G039600 Sobic001G096000 Sobic001G096000 Sobic006G131000--Sobic001G096000 Sobic006G174850 Sobic006G174850 Sobic006G131000--Sobic006G174850 Sobic010G275500 Sobic010G275500 Sobic006G131000--Sobic010G275500 Sobic006G131000--Sobic001G369000 Sobic006G131000--Sobic004G178200
Octagon: transcription factors


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