Gene annotation
Transcriptome id Sobic.004G079800.1
Synonym ATOEP80, TOC75, OEP80, EMB213, Sb04g006590
Functional annotation outer membrane protein, OMP85 family protein, expressed
UniProt C5XXH2
Pfam PF07244 PF01103
Panther DB PTHR12815 PTHR12815:SF7
NCBI CDD -
KEGG Orthology K07277; SAM50, TOB55, outer membrane protein insertion porin family
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G19620 : outer envelope protein of 80 kDa
RAP-DB (Rice) LOC_Os02g10260.1 : outer membrane protein, OMP85 family protein, expressed
MaizeGDB (Corn) Zm00025a019642 , Zm00025a034656
Brachypodium KQJ93858 , KQJ93857
Barley HORVU6Hr1G033430.1 , HORVU6Hr1G033430.11 , HORVU6Hr1G033430.10 , HORVU6Hr1G033430.5 , HORVU6Hr1G033430.3 , HORVU6Hr1G033430.9 , HORVU6Hr1G033430.8 , HORVU6Hr1G033430.7 , HORVU6Hr1G033430.6 , HORVU6Hr1G033430.4
Wheat TraesCS6A02G158800 , TraesCS6D02G153700 , TraesCS6B02G192500
Populus -


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cDNA sequences
Sobic.004G079800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G128300 DUF565 domain containing protein, putative, expressed -
2 Sobic.001G495200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
3 Sobic.009G092900 N-dimethylguanosine tRNA methyltransferase, putative, expressed K00555: TRMT1, tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase
4 Sobic.001G025400 fumarylacetoacetase, putative, expressed K01557: acylpyruvate hydrolase
5 Sobic.003G150800 preprotein translocase subunit secA, chloroplast precursor, putative, expressed K03070: preprotein translocase subunit SecA
6 Sobic.001G198400 mutS domain V family protein, expressed -
7 Sobic.002G274200 expressed protein -
8 Sobic.006G038500 tRNA-dihydrouridine synthase, putative, expressed K05539: tRNA-dihydrouridine synthase A
9 Sobic.003G085100 MYB family transcription factor, putative, expressed -
10 Sobic.008G051300 acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
11 Sobic.005G231100 alpha-hemolysin, putative, expressed K08998: uncharacterized protein
12 Sobic.002G043600 prolyl-tRNA synthetase, putative, expressed K01881: PARS, prolyl-tRNA synthetase
13 Sobic.002G042500 valyl-tRNA synthetase, putative, expressed K01873: VARS, valyl-tRNA synthetase
14 Sobic.004G163800 neutral/alkaline invertase, putative, expressed -
15 Sobic.002G218500 lecithine cholesterol acyltransferase, putative, expressed K00679: phospholipid:diacylglycerol acyltransferase
16 Sobic.004G120100 phosphoglucan, water dikinase, chloroplast precursor, putative, expressed K15535: phosphoglucan, water dikinase
17 Sobic.005G117300 ABC transporter, ATP-binding protein, putative, expressed -
18 Sobic.003G301300 PPR repeat domain containing protein, putative, expressed -
19 Sobic.002G347600 pentatricopeptide containing protein, putative, expressed -
20 Sobic.003G232700 peptide deformylase, putative, expressed K01462: PDF, peptide deformylase


Gene co-expression network
sample Sobic004G079800 Sobic004G079800 Sobic006G128300 Sobic006G128300 Sobic004G079800--Sobic006G128300 Sobic001G495200 Sobic001G495200 Sobic004G079800--Sobic001G495200 Sobic009G092900 Sobic009G092900 Sobic004G079800--Sobic009G092900 Sobic001G025400 Sobic001G025400 Sobic004G079800--Sobic001G025400 Sobic003G150800 Sobic003G150800 Sobic004G079800--Sobic003G150800 Sobic001G198400 Sobic001G198400 Sobic004G079800--Sobic001G198400 Sobic002G274200 Sobic002G274200 Sobic004G079800--Sobic002G274200 Sobic006G038500 Sobic006G038500 Sobic004G079800--Sobic006G038500 Sobic003G085100 Sobic003G085100 Sobic004G079800--Sobic003G085100 Sobic002G218500 Sobic002G218500 Sobic006G128300--Sobic002G218500 Sobic006G128300--Sobic004G079800 Sobic006G128300--Sobic006G038500 Sobic002G431300 Sobic002G431300 Sobic006G128300--Sobic002G431300 Sobic002G347600 Sobic002G347600 Sobic006G128300--Sobic002G347600 Sobic002G042500 Sobic002G042500 Sobic006G128300--Sobic002G042500 Sobic008G001900 Sobic008G001900 Sobic006G128300--Sobic008G001900 Sobic001G126300 Sobic001G126300 Sobic006G128300--Sobic001G126300 Sobic006G031800 Sobic006G031800 Sobic006G128300--Sobic006G031800 Sobic001G495200--Sobic001G126300 Sobic003G232700 Sobic003G232700 Sobic001G495200--Sobic003G232700 Sobic004G336000 Sobic004G336000 Sobic001G495200--Sobic004G336000 Sobic004G011300 Sobic004G011300 Sobic001G495200--Sobic004G011300 Sobic005G143500 Sobic005G143500 Sobic001G495200--Sobic005G143500 Sobic006G106400 Sobic006G106400 Sobic001G495200--Sobic006G106400 Sobic002G181000 Sobic002G181000 Sobic001G495200--Sobic002G181000 Sobic005G110400 Sobic005G110400 Sobic001G495200--Sobic005G110400 Sobic002G043600 Sobic002G043600 Sobic001G495200--Sobic002G043600 Sobic004G003900 Sobic004G003900 Sobic009G092900--Sobic004G003900 Sobic008G090900 Sobic008G090900 Sobic009G092900--Sobic008G090900 Sobic003G045300 Sobic003G045300 Sobic009G092900--Sobic003G045300 Sobic002G181132 Sobic002G181132 Sobic009G092900--Sobic002G181132 Sobic005G117300 Sobic005G117300 Sobic009G092900--Sobic005G117300 Sobic009G092900--Sobic004G079800 Sobic003G128400 Sobic003G128400 Sobic009G092900--Sobic003G128400 Sobic001G375000 Sobic001G375000 Sobic009G092900--Sobic001G375000 Sobic001G346600 Sobic001G346600 Sobic009G092900--Sobic001G346600 Sobic001G025400--Sobic005G110400 Sobic002G401800 Sobic002G401800 Sobic001G025400--Sobic002G401800 Sobic004G336200 Sobic004G336200 Sobic001G025400--Sobic004G336200 Sobic008G073100 Sobic008G073100 Sobic001G025400--Sobic008G073100 Sobic001G368500 Sobic001G368500 Sobic001G025400--Sobic001G368500 Sobic001G025400--Sobic001G495200 Sobic003G387100 Sobic003G387100 Sobic001G025400--Sobic003G387100 Sobic004G016400 Sobic004G016400 Sobic001G025400--Sobic004G016400 Sobic001G309300 Sobic001G309300 Sobic001G025400--Sobic001G309300 Sobic003G150800--Sobic003G085100 Sobic003G150800--Sobic002G042500 Sobic005G111550 Sobic005G111550 Sobic003G150800--Sobic005G111550 Sobic007G005400 Sobic007G005400 Sobic003G150800--Sobic007G005400 Sobic001G037500 Sobic001G037500 Sobic003G150800--Sobic001G037500 Sobic005G063000 Sobic005G063000 Sobic003G150800--Sobic005G063000 Sobic002G314400 Sobic002G314400 Sobic003G150800--Sobic002G314400 Sobic004G328400 Sobic004G328400 Sobic003G150800--Sobic004G328400 Sobic003G141100 Sobic003G141100 Sobic003G150800--Sobic003G141100 Sobic001G198400--Sobic006G038500 Sobic001G198400--Sobic004G079800 Sobic003G234900 Sobic003G234900 Sobic001G198400--Sobic003G234900 Sobic004G120100 Sobic004G120100 Sobic001G198400--Sobic004G120100 Sobic001G198400--Sobic002G347600 Sobic004G163800 Sobic004G163800 Sobic001G198400--Sobic004G163800 Sobic001G528800 Sobic001G528800 Sobic001G198400--Sobic001G528800 Sobic006G216100 Sobic006G216100 Sobic001G198400--Sobic006G216100 Sobic001G198400--Sobic002G042500 Sobic002G274200--Sobic005G110400 Sobic002G272100 Sobic002G272100 Sobic002G274200--Sobic002G272100 Sobic006G021600 Sobic006G021600 Sobic002G274200--Sobic006G021600 Sobic002G274200--Sobic008G073100 Sobic002G405100 Sobic002G405100 Sobic002G274200--Sobic002G405100 Sobic003G077400 Sobic003G077400 Sobic002G274200--Sobic003G077400 Sobic002G274200--Sobic001G368500 Sobic002G274200--Sobic005G143500 Sobic002G274200--Sobic002G401800 Sobic006G038500--Sobic002G347600 Sobic001G465700 Sobic001G465700 Sobic006G038500--Sobic001G465700 Sobic006G038500--Sobic004G120100 Sobic006G038500--Sobic001G126300 Sobic006G038500--Sobic003G141100 Sobic006G038500--Sobic006G128300 Sobic001G516901 Sobic001G516901 Sobic006G038500--Sobic001G516901 Sobic006G038500--Sobic003G232700 Sobic003G160800 Sobic003G160800 Sobic006G038500--Sobic003G160800 Sobic003G085100--Sobic003G150800 Sobic003G085100--Sobic007G005400 Sobic003G085100--Sobic005G111550 Sobic003G085100--Sobic003G160800 Sobic003G085100--Sobic005G063000 Sobic003G233700 Sobic003G233700 Sobic003G085100--Sobic003G233700 Sobic001G001300 Sobic001G001300 Sobic003G085100--Sobic001G001300 Sobic003G287900 Sobic003G287900 Sobic003G085100--Sobic003G287900 Sobic003G085100--Sobic008G001900
Octagon: transcription factors


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