Gene annotation
| Transcriptome id | Sobic.001G495200.1 |
|---|---|
| Synonym | Sorghum bicolor glutathione reductase 1, GR, ATGR2, SbGR1, Sb01g046260, EMB2360 |
| Functional annotation | Glutathione reductases (PubMedID : 23783412) glutathione reductase, putative, expressed |
| UniProt | C5WWX0 |
| Pfam | PF00070 PF02852 |
| Panther DB | PTHR22912 PTHR22912:SF135 |
| NCBI CDD | - |
| KEGG Orthology | K00383; GSR, glutathione reductase (NADPH) |
| Gene Ontology | GO:0016491; oxidoreductase activity |
Orthologs (automatic annotation)
| TAIR | AT3G54660 : glutathione reductase |
|---|---|
| RAP-DB (Rice) | LOC_Os03g06740.1 : glutathione reductase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a000782 |
| Brachypodium | KQK23491 |
| Barley | HORVU4Hr1G073930.4 , HORVU4Hr1G073930.5 , HORVU4Hr1G073930.6 , HORVU4Hr1G073930.7 , HORVU4Hr1G073930.1 , HORVU4Hr1G073930.2 , HORVU4Hr1G073930.3 , HORVU4Hr1G073930.8 |
| Wheat | TraesCS4D02G277400 , TraesCS4D02G277400 , TraesCS4B02G278900 , TraesCS4B02G278900 , TraesCS4A02G025200 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G126300 | adenylosuccinate synthetase, chloroplast precursor, putative, expressed | K01939: purA, adenylosuccinate synthase |
| 2 | Sobic.003G232700 | peptide deformylase, putative, expressed | K01462: PDF, peptide deformylase |
| 3 | Sobic.004G336000 | chaperone protein dnaJ, putative, expressed | K03686: molecular chaperone DnaJ |
| 4 | Sobic.004G011300 | S1 RNA binding domain containing protein, expressed | - |
| 5 | Sobic.005G143500 | aspartyl/glutamyl-tRNA amidotransferase subunit B, putative, expressed | K02434: gatB, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B |
| 6 | Sobic.006G106400 | OsDegp5 - Putative Deg protease homologue, expressed | - |
| 7 | Sobic.002G181000 | chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed | - |
| 8 | Sobic.005G110400 | pentatricopeptide repeat protein PPR986-12, putative, expressed | - |
| 9 | Sobic.002G043600 | prolyl-tRNA synthetase, putative, expressed | K01881: PARS, prolyl-tRNA synthetase |
| 10 | Sobic.001G500600 | pseudouridine synthase family protein, putative, expressed | - |
| 11 | Sobic.009G148500 | GTPase of unknown function domain containing protein, putative, expressed | - |
| 12 | Sobic.005G002900 | OsGrx_S16 - glutaredoxin subgroup II, expressed | - |
| 13 | Sobic.003G301300 | PPR repeat domain containing protein, putative, expressed | - |
| 14 | Sobic.008G073100 | uncharacterized protein ycf45, putative, expressed | - |
| 15 | Sobic.003G432500 | Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed | K03110: fused signal recognition particle receptor |
| 16 | Sobic.001G083100 | Unnamed(PubMedID : 24676859)@WRKY4, expressed | - |
| 17 | Sobic.008G039600 | signal recognition particle 54 kDa protein, putative, expressed | K03106: SRP54, signal recognition particle subunit SRP54 |
| 18 | Sobic.001G025400 | fumarylacetoacetase, putative, expressed | K01557: acylpyruvate hydrolase |
| 19 | Sobic.001G283700 | acyltransferase, putative, expressed | K00630: glycerol-3-phosphate O-acyltransferase |
| 20 | Sobic.006G055800 | mttA/Hcf106 family protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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