Gene annotation
Transcriptome id Sobic.005G002900.1
Synonym Sb05g000420, ATGRX2, CXIP2
Functional annotation OsGrx_S16 - glutaredoxin subgroup II, expressed
UniProt C5Y2Y5
Pfam PF00462
Panther DB PTHR10293 PTHR10293:SF45
NCBI CDD KOG0911; Glutaredoxin-related protein
KEGG Orthology -
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT2G38270 : CAX-interacting protein 2
RAP-DB (Rice) LOC_Os12g07650.1 : OsGrx_S16 - glutaredoxin subgroup II, expressed
MaizeGDB (Corn) Zm00025a013221 , Zm00025a028923
Brachypodium PNT65604 , PNT65601 , KQJ92649 , PNT65602 , PNT65603
Barley -
Wheat TraesCS5A02G154700 , TraesCS5D02G159600 , TraesCS5B02G152900
Populus -


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cDNA sequences
Sobic.005G002900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G083100 Unnamed(PubMedID : 24676859)@WRKY4, expressed -
2 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
3 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -
4 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
5 Sobic.001G291900 expressed protein -
6 Sobic.006G106400 OsDegp5 - Putative Deg protease homologue, expressed -
7 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
8 Sobic.003G232700 peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
9 Sobic.002G131700 RNA recognition motif containing protein, putative, expressed -
10 Sobic.003G141100 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
11 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
12 Sobic.004G333400 COBW domain containing protein, putative, expressed -
13 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
14 Sobic.008G039600 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
15 Sobic.003G324700 expressed protein -
16 Sobic.006G256600 expressed protein -
17 Sobic.004G179200 expressed protein -
18 Sobic.003G372900 deoxynucleoside kinase family, putative, expressed -
19 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
20 Sobic.001G054100 spo0B-associated GTP-binding protein, putative, expressed -


Gene co-expression network
sample Sobic005G002900 Sobic005G002900 Sobic001G083100 Sobic001G083100 Sobic005G002900--Sobic001G083100 Sobic006G055800 Sobic006G055800 Sobic005G002900--Sobic006G055800 Sobic009G148500 Sobic009G148500 Sobic005G002900--Sobic009G148500 Sobic001G469933 Sobic001G469933 Sobic005G002900--Sobic001G469933 Sobic001G291900 Sobic001G291900 Sobic005G002900--Sobic001G291900 Sobic006G106400 Sobic006G106400 Sobic005G002900--Sobic006G106400 Sobic003G432500 Sobic003G432500 Sobic005G002900--Sobic003G432500 Sobic003G232700 Sobic003G232700 Sobic005G002900--Sobic003G232700 Sobic002G131700 Sobic002G131700 Sobic005G002900--Sobic002G131700 Sobic001G083100--Sobic005G002900 Sobic001G083100--Sobic009G148500 Sobic008G039600 Sobic008G039600 Sobic001G083100--Sobic008G039600 Sobic001G083100--Sobic001G469933 Sobic001G083100--Sobic006G055800 Sobic002G272100 Sobic002G272100 Sobic001G083100--Sobic002G272100 Sobic003G372900 Sobic003G372900 Sobic001G083100--Sobic003G372900 Sobic001G054100 Sobic001G054100 Sobic001G083100--Sobic001G054100 Sobic008G073100 Sobic008G073100 Sobic001G083100--Sobic008G073100 Sobic006G055800--Sobic003G432500 Sobic003G324700 Sobic003G324700 Sobic006G055800--Sobic003G324700 Sobic006G055800--Sobic005G002900 Sobic006G055800--Sobic001G469933 Sobic001G368500 Sobic001G368500 Sobic006G055800--Sobic001G368500 Sobic006G055800--Sobic009G148500 Sobic002G152800 Sobic002G152800 Sobic006G055800--Sobic002G152800 Sobic006G055800--Sobic001G083100 Sobic005G110400 Sobic005G110400 Sobic006G055800--Sobic005G110400 Sobic009G148500--Sobic001G083100 Sobic003G151500 Sobic003G151500 Sobic009G148500--Sobic003G151500 Sobic009G148500--Sobic008G073100 Sobic009G148500--Sobic006G055800 Sobic001G126300 Sobic001G126300 Sobic009G148500--Sobic001G126300 Sobic004G011300 Sobic004G011300 Sobic009G148500--Sobic004G011300 Sobic009G148500--Sobic005G002900 Sobic009G148500--Sobic005G110400 Sobic001G500600 Sobic001G500600 Sobic009G148500--Sobic001G500600 Sobic001G122400 Sobic001G122400 Sobic001G469933--Sobic001G122400 Sobic001G469933--Sobic001G368500 Sobic001G469933--Sobic003G324700 Sobic003G077400 Sobic003G077400 Sobic001G469933--Sobic003G077400 Sobic001G469933--Sobic006G055800 Sobic001G469933--Sobic003G432500 Sobic004G335800 Sobic004G335800 Sobic001G469933--Sobic004G335800 Sobic001G469933--Sobic001G083100 Sobic001G469933--Sobic005G110400 Sobic001G291900--Sobic001G368500 Sobic001G104800 Sobic001G104800 Sobic001G291900--Sobic001G104800 Sobic003G085000 Sobic003G085000 Sobic001G291900--Sobic003G085000 Sobic004G336000 Sobic004G336000 Sobic001G291900--Sobic004G336000 Sobic001G291900--Sobic005G002900 Sobic009G059300 Sobic009G059300 Sobic001G291900--Sobic009G059300 Sobic001G309300 Sobic001G309300 Sobic001G291900--Sobic001G309300 Sobic001G291900--Sobic006G055800 Sobic001G291900--Sobic006G106400 Sobic006G106400--Sobic004G011300 Sobic006G106400--Sobic008G073100 Sobic006G106400--Sobic008G039600 Sobic006G106400--Sobic001G368500 Sobic005G143500 Sobic005G143500 Sobic006G106400--Sobic005G143500 Sobic002G401800 Sobic002G401800 Sobic006G106400--Sobic002G401800 Sobic001G283700 Sobic001G283700 Sobic006G106400--Sobic001G283700 Sobic006G106400--Sobic009G148500 Sobic006G106400--Sobic002G272100 Sobic003G432500--Sobic001G368500 Sobic003G432500--Sobic006G055800 Sobic003G432500--Sobic001G469933 Sobic003G271900 Sobic003G271900 Sobic003G432500--Sobic003G271900 Sobic003G432500--Sobic005G110400 Sobic003G432500--Sobic003G324700 Sobic003G432500--Sobic008G073100 Sobic003G432500--Sobic004G336000 Sobic003G432500--Sobic002G152800 Sobic003G232700--Sobic001G500600 Sobic006G197300 Sobic006G197300 Sobic003G232700--Sobic006G197300 Sobic002G181000 Sobic002G181000 Sobic003G232700--Sobic002G181000 Sobic002G043600 Sobic002G043600 Sobic003G232700--Sobic002G043600 Sobic001G495200 Sobic001G495200 Sobic003G232700--Sobic001G495200 Sobic003G141100 Sobic003G141100 Sobic003G232700--Sobic003G141100 Sobic003G352500 Sobic003G352500 Sobic003G232700--Sobic003G352500 Sobic004G238200 Sobic004G238200 Sobic003G232700--Sobic004G238200 Sobic003G301300 Sobic003G301300 Sobic003G232700--Sobic003G301300 Sobic004G179200 Sobic004G179200 Sobic002G131700--Sobic004G179200 Sobic003G330100 Sobic003G330100 Sobic002G131700--Sobic003G330100 Sobic006G111600 Sobic006G111600 Sobic002G131700--Sobic006G111600 Sobic007G171800 Sobic007G171800 Sobic002G131700--Sobic007G171800 Sobic002G131700--Sobic005G002900 Sobic010G035200 Sobic010G035200 Sobic002G131700--Sobic010G035200 Sobic003G221700 Sobic003G221700 Sobic002G131700--Sobic003G221700 Sobic002G131700--Sobic001G469933 Sobic002G131700--Sobic001G083100
Octagon: transcription factors


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