Gene annotation
Transcriptome id Sobic.002G218500.1
Synonym Sb02g026010, ATPDAT, PDAT1, PDAT
Functional annotation lecithine cholesterol acyltransferase, putative, expressed
UniProt C5XDS5
Pfam PF02450
Panther DB PTHR11440 PTHR11440:SF4
NCBI CDD KOG2369; Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase
KEGG Orthology K00679; phospholipid:diacylglycerol acyltransferase
Gene Ontology GO:0008374; O-acyltransferase activity GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT5G13640 : phospholipid:diacylglycerol acyltransferase
RAP-DB (Rice) LOC_Os09g27210.1 : lecithine cholesterol acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a014018 , Zm00025a026864 , Zm00025a047186
Brachypodium KQJ90441
Barley HORVU5Hr1G061360.1 , HORVU5Hr1G061360.2
Wheat TraesCS5D02G213600 , TraesCS5A02G207500 , TraesCS5A02G207500 , TraesCS5B02G205800
Populus -


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cDNA sequences
Sobic.002G218500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G128300 DUF565 domain containing protein, putative, expressed -
2 Sobic.006G031800 - -
3 Sobic.006G038500 tRNA-dihydrouridine synthase, putative, expressed K05539: tRNA-dihydrouridine synthase A
4 Sobic.001G043800 stage II sporulation protein E, putative, expressed -
5 Sobic.002G431300 uncharacterized ACR, YagE family COG1723 containing protein, expressed -
6 Sobic.007G029700 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
7 Sobic.001G516901 - -
8 Sobic.004G079800 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
9 Sobic.005G084800 expressed protein -
10 Sobic.001G025400 fumarylacetoacetase, putative, expressed K01557: acylpyruvate hydrolase
11 Sobic.008G062400 similar to Diphosphonucleotide phosphatase 1(PubMedID : 29862293)@inositol-1-monophosphatase, putative, expressed K15422: 3'(2'), 5'-bisphosphate nucleotidase / inositol polyphosphate 1-phosphatase
12 Sobic.004G144400 riboflavin biosynthesis protein ribD, putative, expressed K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
13 Sobic.001G495200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
14 Sobic.002G413300 expressed protein -
15 Sobic.001G085600 ABC transporter, ATP-binding protein, putative, expressed -
16 Sobic.003G232700 peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
17 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
18 Sobic.002G043600 prolyl-tRNA synthetase, putative, expressed K01881: PARS, prolyl-tRNA synthetase
19 Sobic.009G129100 preprotein translocase subunit secY, putative, expressed -
20 Sobic.006G186600 dihydrodipicolinate synthase, chloroplast precursor, putative, expressed K01714: 4-hydroxy-tetrahydrodipicolinate synthase


Gene co-expression network
sample Sobic002G218500 Sobic002G218500 Sobic006G128300 Sobic006G128300 Sobic002G218500--Sobic006G128300 Sobic006G031800 Sobic006G031800 Sobic002G218500--Sobic006G031800 Sobic006G038500 Sobic006G038500 Sobic002G218500--Sobic006G038500 Sobic001G043800 Sobic001G043800 Sobic002G218500--Sobic001G043800 Sobic002G431300 Sobic002G431300 Sobic002G218500--Sobic002G431300 Sobic007G029700 Sobic007G029700 Sobic002G218500--Sobic007G029700 Sobic001G516901 Sobic001G516901 Sobic002G218500--Sobic001G516901 Sobic004G079800 Sobic004G079800 Sobic002G218500--Sobic004G079800 Sobic005G084800 Sobic005G084800 Sobic002G218500--Sobic005G084800 Sobic006G128300--Sobic002G218500 Sobic006G128300--Sobic004G079800 Sobic006G128300--Sobic006G038500 Sobic006G128300--Sobic002G431300 Sobic002G347600 Sobic002G347600 Sobic006G128300--Sobic002G347600 Sobic002G042500 Sobic002G042500 Sobic006G128300--Sobic002G042500 Sobic008G001900 Sobic008G001900 Sobic006G128300--Sobic008G001900 Sobic001G126300 Sobic001G126300 Sobic006G128300--Sobic001G126300 Sobic006G128300--Sobic006G031800 Sobic009G215500 Sobic009G215500 Sobic006G031800--Sobic009G215500 Sobic001G465700 Sobic001G465700 Sobic006G031800--Sobic001G465700 Sobic007G136800 Sobic007G136800 Sobic006G031800--Sobic007G136800 Sobic003G168100 Sobic003G168100 Sobic006G031800--Sobic003G168100 Sobic003G217700 Sobic003G217700 Sobic006G031800--Sobic003G217700 Sobic003G110800 Sobic003G110800 Sobic006G031800--Sobic003G110800 Sobic006G031800--Sobic006G128300 Sobic006G031800--Sobic006G038500 Sobic006G031800--Sobic002G218500 Sobic006G038500--Sobic002G347600 Sobic006G038500--Sobic001G465700 Sobic004G120100 Sobic004G120100 Sobic006G038500--Sobic004G120100 Sobic006G038500--Sobic001G126300 Sobic003G141100 Sobic003G141100 Sobic006G038500--Sobic003G141100 Sobic006G038500--Sobic006G128300 Sobic006G038500--Sobic001G516901 Sobic003G232700 Sobic003G232700 Sobic006G038500--Sobic003G232700 Sobic003G160800 Sobic003G160800 Sobic006G038500--Sobic003G160800 Sobic001G043800--Sobic007G136800 Sobic006G130800 Sobic006G130800 Sobic001G043800--Sobic006G130800 Sobic004G086700 Sobic004G086700 Sobic001G043800--Sobic004G086700 Sobic001G043800--Sobic002G218500 Sobic001G102500 Sobic001G102500 Sobic001G043800--Sobic001G102500 Sobic001G043800--Sobic006G031800 Sobic001G043800--Sobic007G029700 Sobic001G053000 Sobic001G053000 Sobic001G043800--Sobic001G053000 Sobic001G043800--Sobic002G431300 Sobic004G359100 Sobic004G359100 Sobic002G431300--Sobic004G359100 Sobic003G234900 Sobic003G234900 Sobic002G431300--Sobic003G234900 Sobic004G163800 Sobic004G163800 Sobic002G431300--Sobic004G163800 Sobic002G043600 Sobic002G043600 Sobic002G431300--Sobic002G043600 Sobic002G431300--Sobic006G128300 Sobic006G186600 Sobic006G186600 Sobic002G431300--Sobic006G186600 Sobic002G431300--Sobic006G038500 Sobic002G343400 Sobic002G343400 Sobic002G431300--Sobic002G343400 Sobic002G431300--Sobic003G232700 Sobic007G029700--Sobic008G001900 Sobic001G064000 Sobic001G064000 Sobic007G029700--Sobic001G064000 Sobic007G029700--Sobic006G128300 Sobic007G029700--Sobic001G043800 Sobic007G029700--Sobic006G038500 Sobic007G029700--Sobic002G218500 Sobic009G129100 Sobic009G129100 Sobic007G029700--Sobic009G129100 Sobic004G016400 Sobic004G016400 Sobic007G029700--Sobic004G016400 Sobic009G063100 Sobic009G063100 Sobic007G029700--Sobic009G063100 Sobic001G500600 Sobic001G500600 Sobic001G516901--Sobic001G500600 Sobic006G197300 Sobic006G197300 Sobic001G516901--Sobic006G197300 Sobic004G336200 Sobic004G336200 Sobic001G516901--Sobic004G336200 Sobic001G516901--Sobic002G043600 Sobic009G024300 Sobic009G024300 Sobic001G516901--Sobic009G024300 Sobic010G035400 Sobic010G035400 Sobic001G516901--Sobic010G035400 Sobic004G238200 Sobic004G238200 Sobic001G516901--Sobic004G238200 Sobic002G258600 Sobic002G258600 Sobic001G516901--Sobic002G258600 Sobic001G516901--Sobic003G160800 Sobic004G079800--Sobic006G128300 Sobic001G495200 Sobic001G495200 Sobic004G079800--Sobic001G495200 Sobic009G092900 Sobic009G092900 Sobic004G079800--Sobic009G092900 Sobic001G025400 Sobic001G025400 Sobic004G079800--Sobic001G025400 Sobic003G150800 Sobic003G150800 Sobic004G079800--Sobic003G150800 Sobic001G198400 Sobic001G198400 Sobic004G079800--Sobic001G198400 Sobic002G274200 Sobic002G274200 Sobic004G079800--Sobic002G274200 Sobic004G079800--Sobic006G038500 Sobic003G085100 Sobic003G085100 Sobic004G079800--Sobic003G085100 Sobic005G084800--Sobic004G238200 Sobic005G084800--Sobic004G163800 Sobic005G199400 Sobic005G199400 Sobic005G084800--Sobic005G199400 Sobic003G355900 Sobic003G355900 Sobic005G084800--Sobic003G355900 Sobic003G369400 Sobic003G369400 Sobic005G084800--Sobic003G369400 Sobic005G084500 Sobic005G084500 Sobic005G084800--Sobic005G084500 Sobic003G176000 Sobic003G176000 Sobic005G084800--Sobic003G176000 Sobic005G084800--Sobic002G218500 Sobic010G236300 Sobic010G236300 Sobic005G084800--Sobic010G236300
Octagon: transcription factors


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