Gene annotation
Transcriptome id Sobic.001G049200.2,Sobic.001G049200.1
Synonym Sb01g004510, AAE18
Functional annotation AMP-binding enzyme, putative, expressed
UniProt C5WW74 , A0A1Z5S4F6
Pfam PF00501
Panther DB PTHR24095 PTHR24095:SF153
NCBI CDD KOG1175; Acyl-CoA synthetase
KEGG Orthology -
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT1G55320 : acyl-activating enzyme 18
RAP-DB (Rice) LOC_Os03g59080.1 : AMP-binding enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a048893 , Zm00025a008639
Brachypodium KQK12602
Barley HORVU5Hr1G109400.7 , HORVU5Hr1G109400.6 , HORVU5Hr1G109400.5 , HORVU5Hr1G109400.3 , HORVU5Hr1G109400.2 , HORVU5Hr1G109400.9 , HORVU5Hr1G109400.8 , HORVU5Hr1G109400.17 , HORVU5Hr1G109400.16 , HORVU5Hr1G109400.15 , HORVU5Hr1G109400.14 , HORVU5Hr1G109400.13 , HORVU5Hr1G109400.12 , HORVU5Hr1G109400.11 , HORVU5Hr1G109400.10 , HORVU6Hr1G054710.1 , HORVU5Hr1G109390.3 , HORVU5Hr1G109390.2 , HORVU5Hr1G109390.1 , HORVU5Hr1G109400.4
Wheat TraesCS7D02G089000 , TraesCS4A02G394300 , TraesCS5B02G463700 , TraesCS5B02G463700 , TraesCS5B02G463700 , TraesCS5D02G466100 , TraesCS7A02G093700 , TraesCS7A02G093700 , TraesCS7A02G093700 , TraesCS4A02G394300 , TraesCS5B02G463600 , TraesCS4A02G393100 , TraesCS5A02G455500 , TraesCS5D02G466000 , TraesCS5A02G455400
Populus -


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cDNA sequences
Sobic.001G049200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G179200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
2 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
3 Sobic.010G161450 - -
4 Sobic.002G242500 Expressed in older stem(PubMedID : 28649278)@WRKY90, expressed K18835: WRKY transcription factor 2
5 Sobic.007G221100 GRAM and C2 domains containing protein, putative, expressed -
6 Sobic.002G294200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
7 Sobic.004G132300 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
8 Sobic.006G176600 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
9 Sobic.007G098400 tyrosine protein kinase domain containing protein, putative, expressed -
10 Sobic.001G456100 integral membrane protein, putative, expressed -
11 Sobic.007G136100 uncharacterized protein family UPF0016 domain containing protein, expressed -
12 Sobic.004G021300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
13 Sobic.004G173600 OsPDIL5-3 protein disulfide isomerase PDIL5-3, expressed K09580: PDIA1, protein disulfide-isomerase A1
14 Sobic.010G193900 N-terminal asparagine amidohydrolase, putative, expressed K14662: protein N-terminal asparagine amidohydrolase
15 Sobic.005G211400 cytochrome P450, putative, expressed -
16 Sobic.009G088100 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.003G167500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
18 Sobic.003G261500 lipase, putative, expressed -
19 Sobic.003G261400 DUF292 domain containing protein, expressed -
20 Sobic.004G222800 expressed protein -


Gene co-expression network
sample Sobic001G049200 Sobic001G049200 Sobic009G179200 Sobic009G179200 Sobic001G049200--Sobic009G179200 Sobic002G114800 Sobic002G114800 Sobic001G049200--Sobic002G114800 Sobic010G161450 Sobic010G161450 Sobic001G049200--Sobic010G161450 Sobic002G242500 Sobic002G242500 Sobic001G049200--Sobic002G242500 Sobic007G221100 Sobic007G221100 Sobic001G049200--Sobic007G221100 Sobic002G294200 Sobic002G294200 Sobic001G049200--Sobic002G294200 Sobic004G132300 Sobic004G132300 Sobic001G049200--Sobic004G132300 Sobic006G176600 Sobic006G176600 Sobic001G049200--Sobic006G176600 Sobic007G098400 Sobic007G098400 Sobic001G049200--Sobic007G098400 Sobic009G179200--Sobic001G049200 Sobic009G179200--Sobic002G294200 Sobic001G403700 Sobic001G403700 Sobic009G179200--Sobic001G403700 Sobic003G261400 Sobic003G261400 Sobic009G179200--Sobic003G261400 Sobic009G179200--Sobic002G242500 Sobic004G130900 Sobic004G130900 Sobic009G179200--Sobic004G130900 Sobic007G132700 Sobic007G132700 Sobic009G179200--Sobic007G132700 Sobic001G078800 Sobic001G078800 Sobic009G179200--Sobic001G078800 Sobic010G062800 Sobic010G062800 Sobic009G179200--Sobic010G062800 Sobic002G114800--Sobic001G049200 Sobic009G177400 Sobic009G177400 Sobic002G114800--Sobic009G177400 Sobic001G328000 Sobic001G328000 Sobic002G114800--Sobic001G328000 Sobic004G163300 Sobic004G163300 Sobic002G114800--Sobic004G163300 Sobic004G173600 Sobic004G173600 Sobic002G114800--Sobic004G173600 Sobic009G102300 Sobic009G102300 Sobic002G114800--Sobic009G102300 Sobic002G306700 Sobic002G306700 Sobic002G114800--Sobic002G306700 Sobic005G134600 Sobic005G134600 Sobic002G114800--Sobic005G134600 Sobic001G540100 Sobic001G540100 Sobic002G114800--Sobic001G540100 Sobic010G220600 Sobic010G220600 Sobic010G161450--Sobic010G220600 Sobic010G161450--Sobic001G049200 Sobic001G386400 Sobic001G386400 Sobic010G161450--Sobic001G386400 Sobic006G064800 Sobic006G064800 Sobic010G161450--Sobic006G064800 Sobic003G273700 Sobic003G273700 Sobic010G161450--Sobic003G273700 Sobic010G161450--Sobic002G242500 Sobic007G136100 Sobic007G136100 Sobic010G161450--Sobic007G136100 Sobic003G167500 Sobic003G167500 Sobic010G161450--Sobic003G167500 Sobic010G161450--Sobic007G221100 Sobic002G242500--Sobic002G294200 Sobic002G242500--Sobic007G098400 Sobic004G145200 Sobic004G145200 Sobic002G242500--Sobic004G145200 Sobic003G049300 Sobic003G049300 Sobic002G242500--Sobic003G049300 Sobic002G242500--Sobic001G049200 Sobic002G242500--Sobic003G167500 Sobic002G242500--Sobic007G221100 Sobic002G242500--Sobic001G403700 Sobic005G211400 Sobic005G211400 Sobic002G242500--Sobic005G211400 Sobic007G221100--Sobic002G242500 Sobic007G221100--Sobic001G049200 Sobic007G221100--Sobic003G273700 Sobic007G221100--Sobic009G179200 Sobic001G456100 Sobic001G456100 Sobic007G221100--Sobic001G456100 Sobic010G192432 Sobic010G192432 Sobic007G221100--Sobic010G192432 Sobic006G191100 Sobic006G191100 Sobic007G221100--Sobic006G191100 Sobic006G075600 Sobic006G075600 Sobic007G221100--Sobic006G075600 Sobic007G221100--Sobic010G220600 Sobic002G294200--Sobic002G242500 Sobic004G274400 Sobic004G274400 Sobic002G294200--Sobic004G274400 Sobic002G294200--Sobic009G179200 Sobic001G283200 Sobic001G283200 Sobic002G294200--Sobic001G283200 Sobic002G294200--Sobic006G176600 Sobic006G148200 Sobic006G148200 Sobic002G294200--Sobic006G148200 Sobic010G193900 Sobic010G193900 Sobic002G294200--Sobic010G193900 Sobic006G281800 Sobic006G281800 Sobic002G294200--Sobic006G281800 Sobic010G064600 Sobic010G064600 Sobic002G294200--Sobic010G064600 Sobic004G132300--Sobic001G283200 Sobic001G033500 Sobic001G033500 Sobic004G132300--Sobic001G033500 Sobic006G217700 Sobic006G217700 Sobic004G132300--Sobic006G217700 Sobic001G206900 Sobic001G206900 Sobic004G132300--Sobic001G206900 Sobic004G132300--Sobic006G148200 Sobic001G237500 Sobic001G237500 Sobic004G132300--Sobic001G237500 Sobic004G132300--Sobic002G294200 Sobic004G132300--Sobic004G274400 Sobic006G034000 Sobic006G034000 Sobic004G132300--Sobic006G034000 Sobic006G176600--Sobic002G294200 Sobic006G176600--Sobic010G193900 Sobic010G002400 Sobic010G002400 Sobic006G176600--Sobic010G002400 Sobic006G176600--Sobic006G148200 Sobic006G176600--Sobic001G049200 Sobic006G222100 Sobic006G222100 Sobic006G176600--Sobic006G222100 Sobic004G237600 Sobic004G237600 Sobic006G176600--Sobic004G237600 Sobic006G176600--Sobic007G136100 Sobic003G012200 Sobic003G012200 Sobic006G176600--Sobic003G012200 Sobic007G098400--Sobic002G242500 Sobic007G098400--Sobic005G211400 Sobic009G241700 Sobic009G241700 Sobic007G098400--Sobic009G241700 Sobic001G010400 Sobic001G010400 Sobic007G098400--Sobic001G010400 Sobic007G098400--Sobic001G049200 Sobic001G380400 Sobic001G380400 Sobic007G098400--Sobic001G380400 Sobic001G090000 Sobic001G090000 Sobic007G098400--Sobic001G090000 Sobic007G098400--Sobic003G273700 Sobic007G098400--Sobic002G294200
Octagon: transcription factors


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