Gene annotation
Transcriptome id Sobic.002G242500.2,Sobic.002G242500.1
Synonym ATWRKY2, Sb02g027950, WRKY2
Functional annotation Expressed in older stem (PubMedID : 28649278)
WRKY90, expressed
UniProt A0A1B6QD73
Pfam PF03106
Panther DB PTHR31221 PTHR31221:SF35
NCBI CDD -
KEGG Orthology K18835; WRKY transcription factor 2
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G56270 : WRKY DNA-binding protein 2
RAP-DB (Rice) LOC_Os09g30400.1,LOC_Os09g30400.3 : WRKY90, expressed
MaizeGDB (Corn) Zm00025a047402 , Zm00025a014182 , Zm00025a034258
Brachypodium KQJ98825 , KQJ90704 , PNT64808
Barley HORVU5Hr1G072020.8 , HORVU5Hr1G072020.9 , HORVU5Hr1G072020.1 , HORVU5Hr1G072020.2 , HORVU5Hr1G072020.3 , HORVU5Hr1G072020.4 , HORVU5Hr1G072020.5 , HORVU5Hr1G072020.6 , HORVU5Hr1G072020.7 , HORVU7Hr1G049130.1 , HORVU5Hr1G072020.12 , HORVU5Hr1G072020.13 , HORVU5Hr1G072020.10 , HORVU5Hr1G072020.11 , HORVU5Hr1G072020.16 , HORVU5Hr1G072020.17 , HORVU5Hr1G072020.14 , HORVU5Hr1G072020.15
Wheat TraesCS5D02G266300 , TraesCS5A02G258100 , TraesCS5B02G257300 , TraesCS5B02G257300
Populus PNT30880


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cDNA sequences
Sobic.002G242500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G294200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
2 Sobic.007G098400 tyrosine protein kinase domain containing protein, putative, expressed -
3 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
4 Sobic.003G049300 expressed protein -
5 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
6 Sobic.003G167500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
7 Sobic.007G221100 GRAM and C2 domains containing protein, putative, expressed -
8 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
9 Sobic.005G211400 cytochrome P450, putative, expressed -
10 Sobic.009G241700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
11 Sobic.009G179200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
12 Sobic.006G076201 - -
13 Sobic.004G284500 ORM1, putative, expressed -
14 Sobic.002G083266 - K00326: cytochrome-b5 reductase
15 Sobic.004G204900 glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
16 Sobic.002G362900 IBS1, putative, expressed -
17 Sobic.001G380400 reticulon domain containing protein, putative, expressed -
18 Sobic.009G127000 leucine-rich repeat family protein, putative, expressed -
19 Sobic.010G161450 - -
20 Sobic.001G196300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase


Gene co-expression network
sample Sobic002G242500 Sobic002G242500 Sobic002G294200 Sobic002G294200 Sobic002G242500--Sobic002G294200 Sobic007G098400 Sobic007G098400 Sobic002G242500--Sobic007G098400 Sobic004G145200 Sobic004G145200 Sobic002G242500--Sobic004G145200 Sobic003G049300 Sobic003G049300 Sobic002G242500--Sobic003G049300 Sobic001G049200 Sobic001G049200 Sobic002G242500--Sobic001G049200 Sobic003G167500 Sobic003G167500 Sobic002G242500--Sobic003G167500 Sobic007G221100 Sobic007G221100 Sobic002G242500--Sobic007G221100 Sobic001G403700 Sobic001G403700 Sobic002G242500--Sobic001G403700 Sobic005G211400 Sobic005G211400 Sobic002G242500--Sobic005G211400 Sobic002G294200--Sobic002G242500 Sobic004G274400 Sobic004G274400 Sobic002G294200--Sobic004G274400 Sobic009G179200 Sobic009G179200 Sobic002G294200--Sobic009G179200 Sobic001G283200 Sobic001G283200 Sobic002G294200--Sobic001G283200 Sobic006G176600 Sobic006G176600 Sobic002G294200--Sobic006G176600 Sobic006G148200 Sobic006G148200 Sobic002G294200--Sobic006G148200 Sobic010G193900 Sobic010G193900 Sobic002G294200--Sobic010G193900 Sobic006G281800 Sobic006G281800 Sobic002G294200--Sobic006G281800 Sobic010G064600 Sobic010G064600 Sobic002G294200--Sobic010G064600 Sobic007G098400--Sobic002G242500 Sobic007G098400--Sobic005G211400 Sobic009G241700 Sobic009G241700 Sobic007G098400--Sobic009G241700 Sobic001G010400 Sobic001G010400 Sobic007G098400--Sobic001G010400 Sobic007G098400--Sobic001G049200 Sobic001G380400 Sobic001G380400 Sobic007G098400--Sobic001G380400 Sobic001G090000 Sobic001G090000 Sobic007G098400--Sobic001G090000 Sobic003G273700 Sobic003G273700 Sobic007G098400--Sobic003G273700 Sobic007G098400--Sobic002G294200 Sobic010G228000 Sobic010G228000 Sobic004G145200--Sobic010G228000 Sobic008G016900 Sobic008G016900 Sobic004G145200--Sobic008G016900 Sobic007G188100 Sobic007G188100 Sobic004G145200--Sobic007G188100 Sobic006G076201 Sobic006G076201 Sobic004G145200--Sobic006G076201 Sobic010G062800 Sobic010G062800 Sobic004G145200--Sobic010G062800 Sobic002G362900 Sobic002G362900 Sobic004G145200--Sobic002G362900 Sobic001G012800 Sobic001G012800 Sobic004G145200--Sobic001G012800 Sobic004G145200--Sobic002G242500 Sobic002G118600 Sobic002G118600 Sobic004G145200--Sobic002G118600 Sobic003G049300--Sobic002G242500 Sobic003G049300--Sobic004G145200 Sobic010G225100 Sobic010G225100 Sobic003G049300--Sobic010G225100 Sobic003G049300--Sobic006G076201 Sobic002G210901 Sobic002G210901 Sobic003G049300--Sobic002G210901 Sobic009G149400 Sobic009G149400 Sobic003G049300--Sobic009G149400 Sobic003G049300--Sobic010G228000 Sobic009G155200 Sobic009G155200 Sobic003G049300--Sobic009G155200 Sobic010G236500 Sobic010G236500 Sobic003G049300--Sobic010G236500 Sobic001G049200--Sobic009G179200 Sobic002G114800 Sobic002G114800 Sobic001G049200--Sobic002G114800 Sobic010G161450 Sobic010G161450 Sobic001G049200--Sobic010G161450 Sobic001G049200--Sobic002G242500 Sobic001G049200--Sobic007G221100 Sobic001G049200--Sobic002G294200 Sobic004G132300 Sobic004G132300 Sobic001G049200--Sobic004G132300 Sobic001G049200--Sobic006G176600 Sobic001G049200--Sobic007G098400 Sobic003G167500--Sobic002G242500 Sobic001G196300 Sobic001G196300 Sobic003G167500--Sobic001G196300 Sobic009G236200 Sobic009G236200 Sobic003G167500--Sobic009G236200 Sobic002G355200 Sobic002G355200 Sobic003G167500--Sobic002G355200 Sobic009G167700 Sobic009G167700 Sobic003G167500--Sobic009G167700 Sobic003G167500--Sobic001G010400 Sobic003G167500--Sobic001G049200 Sobic003G167500--Sobic010G161450 Sobic010G016400 Sobic010G016400 Sobic003G167500--Sobic010G016400 Sobic007G221100--Sobic002G242500 Sobic007G221100--Sobic001G049200 Sobic007G221100--Sobic003G273700 Sobic007G221100--Sobic009G179200 Sobic001G456100 Sobic001G456100 Sobic007G221100--Sobic001G456100 Sobic010G192432 Sobic010G192432 Sobic007G221100--Sobic010G192432 Sobic006G191100 Sobic006G191100 Sobic007G221100--Sobic006G191100 Sobic006G075600 Sobic006G075600 Sobic007G221100--Sobic006G075600 Sobic010G220600 Sobic010G220600 Sobic007G221100--Sobic010G220600 Sobic009G111600 Sobic009G111600 Sobic001G403700--Sobic009G111600 Sobic004G284500 Sobic004G284500 Sobic001G403700--Sobic004G284500 Sobic002G078400 Sobic002G078400 Sobic001G403700--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic001G403700--Sobic006G182100 Sobic002G296300 Sobic002G296300 Sobic001G403700--Sobic002G296300 Sobic003G248600 Sobic003G248600 Sobic001G403700--Sobic003G248600 Sobic008G132800 Sobic008G132800 Sobic001G403700--Sobic008G132800 Sobic002G214900 Sobic002G214900 Sobic001G403700--Sobic002G214900 Sobic010G213400 Sobic010G213400 Sobic001G403700--Sobic010G213400 Sobic005G211400--Sobic009G241700 Sobic005G211400--Sobic007G098400 Sobic005G211400--Sobic002G242500 Sobic003G294400 Sobic003G294400 Sobic005G211400--Sobic003G294400 Sobic004G232400 Sobic004G232400 Sobic005G211400--Sobic004G232400 Sobic005G211400--Sobic004G145200 Sobic005G211400--Sobic006G076201 Sobic005G211400--Sobic001G090000 Sobic005G211400--Sobic001G403700
Octagon: transcription factors


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