Gene annotation
Transcriptome id Sobic.010G161450.1
Synonym -
Functional annotation -
UniProt C6JSC9 , A0A120GUM5
Pfam PF10250
Panther DB PTHR31933 PTHR31933:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G29200 : O-fucosyltransferase family protein
RAP-DB (Rice) LOC_Os06g35410.1 : growth regulator related protein, putative, expressed
MaizeGDB (Corn) Zm00025a050971
Brachypodium KQK18288 , KQK18287
Barley HORVU0Hr1G021810.16 , HORVU0Hr1G021810.17 , HORVU0Hr1G021810.14 , HORVU0Hr1G021810.15 , HORVU0Hr1G021810.12 , HORVU0Hr1G021810.13 , HORVU0Hr1G021810.10 , HORVU0Hr1G021810.11 , HORVU0Hr1G021810.18 , HORVU0Hr1G021810.19 , HORVU0Hr1G021810.4 , HORVU0Hr1G021810.5 , HORVU0Hr1G021810.6 , HORVU0Hr1G021810.7 , HORVU0Hr1G021810.1 , HORVU0Hr1G021810.2 , HORVU0Hr1G021810.3 , HORVU0Hr1G021810.8 , HORVU0Hr1G021810.9
Wheat TraesCS7D02G370600 , TraesCS7B02G275600 , TraesCS7B02G275600 , TraesCS7A02G352500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G220600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
2 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
3 Sobic.001G386400 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
4 Sobic.006G064800 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
5 Sobic.003G273700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
6 Sobic.002G242500 Expressed in older stem(PubMedID : 28649278)@WRKY90, expressed K18835: WRKY transcription factor 2
7 Sobic.007G136100 uncharacterized protein family UPF0016 domain containing protein, expressed -
8 Sobic.003G167500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
9 Sobic.007G221100 GRAM and C2 domains containing protein, putative, expressed -
10 Sobic.002G024100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
11 Sobic.002G294200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
12 Sobic.007G098400 tyrosine protein kinase domain containing protein, putative, expressed -
13 Sobic.004G173600 OsPDIL5-3 protein disulfide isomerase PDIL5-3, expressed K09580: PDIA1, protein disulfide-isomerase A1
14 Sobic.004G222800 expressed protein -
15 Sobic.010G192432 - K14431: transcription factor TGA
16 Sobic.003G432100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase
17 Sobic.004G132300 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
18 Sobic.009G179200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
19 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
20 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -


Gene co-expression network
sample Sobic010G161450 Sobic010G161450 Sobic010G220600 Sobic010G220600 Sobic010G161450--Sobic010G220600 Sobic001G049200 Sobic001G049200 Sobic010G161450--Sobic001G049200 Sobic001G386400 Sobic001G386400 Sobic010G161450--Sobic001G386400 Sobic006G064800 Sobic006G064800 Sobic010G161450--Sobic006G064800 Sobic003G273700 Sobic003G273700 Sobic010G161450--Sobic003G273700 Sobic002G242500 Sobic002G242500 Sobic010G161450--Sobic002G242500 Sobic007G136100 Sobic007G136100 Sobic010G161450--Sobic007G136100 Sobic003G167500 Sobic003G167500 Sobic010G161450--Sobic003G167500 Sobic007G221100 Sobic007G221100 Sobic010G161450--Sobic007G221100 Sobic010G220600--Sobic010G161450 Sobic003G432100 Sobic003G432100 Sobic010G220600--Sobic003G432100 Sobic010G220600--Sobic001G386400 Sobic003G348800 Sobic003G348800 Sobic010G220600--Sobic003G348800 Sobic010G220600--Sobic007G221100 Sobic010G220600--Sobic006G064800 Sobic010G220600--Sobic003G273700 Sobic002G155400 Sobic002G155400 Sobic010G220600--Sobic002G155400 Sobic010G192432 Sobic010G192432 Sobic010G220600--Sobic010G192432 Sobic009G179200 Sobic009G179200 Sobic001G049200--Sobic009G179200 Sobic002G114800 Sobic002G114800 Sobic001G049200--Sobic002G114800 Sobic001G049200--Sobic010G161450 Sobic001G049200--Sobic002G242500 Sobic001G049200--Sobic007G221100 Sobic002G294200 Sobic002G294200 Sobic001G049200--Sobic002G294200 Sobic004G132300 Sobic004G132300 Sobic001G049200--Sobic004G132300 Sobic006G176600 Sobic006G176600 Sobic001G049200--Sobic006G176600 Sobic007G098400 Sobic007G098400 Sobic001G049200--Sobic007G098400 Sobic006G119200 Sobic006G119200 Sobic001G386400--Sobic006G119200 Sobic009G167700 Sobic009G167700 Sobic001G386400--Sobic009G167700 Sobic009G000200 Sobic009G000200 Sobic001G386400--Sobic009G000200 Sobic003G316300 Sobic003G316300 Sobic001G386400--Sobic003G316300 Sobic001G386400--Sobic002G155400 Sobic001G386400--Sobic010G161450 Sobic004G106900 Sobic004G106900 Sobic001G386400--Sobic004G106900 Sobic002G024100 Sobic002G024100 Sobic001G386400--Sobic002G024100 Sobic004G341200 Sobic004G341200 Sobic001G386400--Sobic004G341200 Sobic006G087900 Sobic006G087900 Sobic006G064800--Sobic006G087900 Sobic005G195600 Sobic005G195600 Sobic006G064800--Sobic005G195600 Sobic003G374700 Sobic003G374700 Sobic006G064800--Sobic003G374700 Sobic002G362900 Sobic002G362900 Sobic006G064800--Sobic002G362900 Sobic006G064800--Sobic010G161450 Sobic001G012800 Sobic001G012800 Sobic006G064800--Sobic001G012800 Sobic001G051800 Sobic001G051800 Sobic006G064800--Sobic001G051800 Sobic010G236500 Sobic010G236500 Sobic006G064800--Sobic010G236500 Sobic009G073000 Sobic009G073000 Sobic006G064800--Sobic009G073000 Sobic001G302500 Sobic001G302500 Sobic003G273700--Sobic001G302500 Sobic003G273700--Sobic010G192432 Sobic010G194100 Sobic010G194100 Sobic003G273700--Sobic010G194100 Sobic006G230300 Sobic006G230300 Sobic003G273700--Sobic006G230300 Sobic002G283900 Sobic002G283900 Sobic003G273700--Sobic002G283900 Sobic003G273700--Sobic007G221100 Sobic003G389000 Sobic003G389000 Sobic003G273700--Sobic003G389000 Sobic001G456100 Sobic001G456100 Sobic003G273700--Sobic001G456100 Sobic003G273700--Sobic010G161450 Sobic002G242500--Sobic002G294200 Sobic002G242500--Sobic007G098400 Sobic004G145200 Sobic004G145200 Sobic002G242500--Sobic004G145200 Sobic003G049300 Sobic003G049300 Sobic002G242500--Sobic003G049300 Sobic002G242500--Sobic001G049200 Sobic002G242500--Sobic003G167500 Sobic002G242500--Sobic007G221100 Sobic001G403700 Sobic001G403700 Sobic002G242500--Sobic001G403700 Sobic005G211400 Sobic005G211400 Sobic002G242500--Sobic005G211400 Sobic001G283200 Sobic001G283200 Sobic007G136100--Sobic001G283200 Sobic010G193900 Sobic010G193900 Sobic007G136100--Sobic010G193900 Sobic003G055700 Sobic003G055700 Sobic007G136100--Sobic003G055700 Sobic003G261400 Sobic003G261400 Sobic007G136100--Sobic003G261400 Sobic003G372000 Sobic003G372000 Sobic007G136100--Sobic003G372000 Sobic004G081800 Sobic004G081800 Sobic007G136100--Sobic004G081800 Sobic003G261500 Sobic003G261500 Sobic007G136100--Sobic003G261500 Sobic007G136100--Sobic006G176600 Sobic007G136100--Sobic001G049200 Sobic003G167500--Sobic002G242500 Sobic001G196300 Sobic001G196300 Sobic003G167500--Sobic001G196300 Sobic009G236200 Sobic009G236200 Sobic003G167500--Sobic009G236200 Sobic002G355200 Sobic002G355200 Sobic003G167500--Sobic002G355200 Sobic003G167500--Sobic009G167700 Sobic001G010400 Sobic001G010400 Sobic003G167500--Sobic001G010400 Sobic003G167500--Sobic001G049200 Sobic003G167500--Sobic010G161450 Sobic010G016400 Sobic010G016400 Sobic003G167500--Sobic010G016400 Sobic007G221100--Sobic002G242500 Sobic007G221100--Sobic001G049200 Sobic007G221100--Sobic003G273700 Sobic007G221100--Sobic009G179200 Sobic007G221100--Sobic001G456100 Sobic007G221100--Sobic010G192432 Sobic006G191100 Sobic006G191100 Sobic007G221100--Sobic006G191100 Sobic006G075600 Sobic006G075600 Sobic007G221100--Sobic006G075600 Sobic007G221100--Sobic010G220600
Octagon: transcription factors


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