Gene annotation
Transcriptome id Sobic.007G221100.1,Sobic.007G221100.2
Synonym Sb07g028720
Functional annotation GRAM and C2 domains containing protein, putative, expressed
UniProt A0A1Z5RB66 , C5YJC5
Pfam PF02893 PF00168 PF16016 PF00168 PF02893 PF16016
Panther DB PTHR10774 PTHR10774:SF97
NCBI CDD KOG1032; Uncharacterized conserved protein, contains GRAM domain
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G03370 : C2 calcium/lipid-binding and GRAM domain containing protein
RAP-DB (Rice) LOC_Os08g38440.1 : GRAM and C2 domains containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a033636 , Zm00025a054813 , Zm00025a017600 , Zm00025a004973
Brachypodium KQJ98783
Barley HORVU6Hr1G067360.3 , HORVU6Hr1G067360.1 , HORVU6Hr1G067360.6 , HORVU6Hr1G067360.7 , HORVU6Hr1G067360.4 , HORVU6Hr1G067360.5 , HORVU6Hr1G067360.8 , HORVU6Hr1G067360.9 , HORVU6Hr1G067360.2 , HORVU6Hr1G067360.10 , HORVU6Hr1G067360.11
Wheat TraesCS6B02G292300 , TraesCS6B02G292300 , TraesCS6D02G249400 , TraesCS6D02G249400 , TraesCS6D02G249400 , TraesCS6A02G265500 , TraesCS6A02G265500 , TraesCS6A02G265500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G242500 Expressed in older stem(PubMedID : 28649278)@WRKY90, expressed K18835: WRKY transcription factor 2
2 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
3 Sobic.003G273700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
4 Sobic.009G179200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
5 Sobic.001G456100 integral membrane protein, putative, expressed -
6 Sobic.010G192432 - K14431: transcription factor TGA
7 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
8 Sobic.006G075600 WD-40 repeat family protein, putative, expressed -
9 Sobic.010G220600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
10 Sobic.004G103400 verticillium wilt disease resistance protein, putative, expressed -
11 Sobic.010G161450 - -
12 Sobic.002G362900 IBS1, putative, expressed -
13 Sobic.002G294200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
14 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
15 Sobic.010G194100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
16 Sobic.005G211400 cytochrome P450, putative, expressed -
17 Sobic.007G098400 tyrosine protein kinase domain containing protein, putative, expressed -
18 Sobic.006G076201 - -
19 Sobic.001G260600 expressed protein -
20 Sobic.006G064800 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -


Gene co-expression network
sample Sobic007G221100 Sobic007G221100 Sobic002G242500 Sobic002G242500 Sobic007G221100--Sobic002G242500 Sobic001G049200 Sobic001G049200 Sobic007G221100--Sobic001G049200 Sobic003G273700 Sobic003G273700 Sobic007G221100--Sobic003G273700 Sobic009G179200 Sobic009G179200 Sobic007G221100--Sobic009G179200 Sobic001G456100 Sobic001G456100 Sobic007G221100--Sobic001G456100 Sobic010G192432 Sobic010G192432 Sobic007G221100--Sobic010G192432 Sobic006G191100 Sobic006G191100 Sobic007G221100--Sobic006G191100 Sobic006G075600 Sobic006G075600 Sobic007G221100--Sobic006G075600 Sobic010G220600 Sobic010G220600 Sobic007G221100--Sobic010G220600 Sobic002G294200 Sobic002G294200 Sobic002G242500--Sobic002G294200 Sobic007G098400 Sobic007G098400 Sobic002G242500--Sobic007G098400 Sobic004G145200 Sobic004G145200 Sobic002G242500--Sobic004G145200 Sobic003G049300 Sobic003G049300 Sobic002G242500--Sobic003G049300 Sobic002G242500--Sobic001G049200 Sobic003G167500 Sobic003G167500 Sobic002G242500--Sobic003G167500 Sobic002G242500--Sobic007G221100 Sobic001G403700 Sobic001G403700 Sobic002G242500--Sobic001G403700 Sobic005G211400 Sobic005G211400 Sobic002G242500--Sobic005G211400 Sobic001G049200--Sobic009G179200 Sobic002G114800 Sobic002G114800 Sobic001G049200--Sobic002G114800 Sobic010G161450 Sobic010G161450 Sobic001G049200--Sobic010G161450 Sobic001G049200--Sobic002G242500 Sobic001G049200--Sobic007G221100 Sobic001G049200--Sobic002G294200 Sobic004G132300 Sobic004G132300 Sobic001G049200--Sobic004G132300 Sobic006G176600 Sobic006G176600 Sobic001G049200--Sobic006G176600 Sobic001G049200--Sobic007G098400 Sobic001G302500 Sobic001G302500 Sobic003G273700--Sobic001G302500 Sobic003G273700--Sobic010G192432 Sobic010G194100 Sobic010G194100 Sobic003G273700--Sobic010G194100 Sobic006G230300 Sobic006G230300 Sobic003G273700--Sobic006G230300 Sobic002G283900 Sobic002G283900 Sobic003G273700--Sobic002G283900 Sobic003G273700--Sobic007G221100 Sobic003G389000 Sobic003G389000 Sobic003G273700--Sobic003G389000 Sobic003G273700--Sobic001G456100 Sobic003G273700--Sobic010G161450 Sobic009G179200--Sobic001G049200 Sobic009G179200--Sobic002G294200 Sobic009G179200--Sobic001G403700 Sobic003G261400 Sobic003G261400 Sobic009G179200--Sobic003G261400 Sobic009G179200--Sobic002G242500 Sobic004G130900 Sobic004G130900 Sobic009G179200--Sobic004G130900 Sobic007G132700 Sobic007G132700 Sobic009G179200--Sobic007G132700 Sobic001G078800 Sobic001G078800 Sobic009G179200--Sobic001G078800 Sobic010G062800 Sobic010G062800 Sobic009G179200--Sobic010G062800 Sobic001G456100--Sobic006G230300 Sobic001G456100--Sobic010G194100 Sobic001G456100--Sobic001G049200 Sobic001G456100--Sobic003G273700 Sobic001G456100--Sobic007G221100 Sobic007G157900 Sobic007G157900 Sobic001G456100--Sobic007G157900 Sobic010G193900 Sobic010G193900 Sobic001G456100--Sobic010G193900 Sobic009G238900 Sobic009G238900 Sobic001G456100--Sobic009G238900 Sobic001G456100--Sobic002G242500 Sobic010G192366 Sobic010G192366 Sobic010G192432--Sobic010G192366 Sobic004G078800 Sobic004G078800 Sobic010G192432--Sobic004G078800 Sobic003G227700 Sobic003G227700 Sobic010G192432--Sobic003G227700 Sobic001G483600 Sobic001G483600 Sobic010G192432--Sobic001G483600 Sobic001G067100 Sobic001G067100 Sobic010G192432--Sobic001G067100 Sobic006G135300 Sobic006G135300 Sobic010G192432--Sobic006G135300 Sobic010G097200 Sobic010G097200 Sobic010G192432--Sobic010G097200 Sobic010G071400 Sobic010G071400 Sobic010G192432--Sobic010G071400 Sobic007G100700 Sobic007G100700 Sobic010G192432--Sobic007G100700 Sobic005G195600 Sobic005G195600 Sobic006G191100--Sobic005G195600 Sobic006G087900 Sobic006G087900 Sobic006G191100--Sobic006G087900 Sobic006G076201 Sobic006G076201 Sobic006G191100--Sobic006G076201 Sobic002G362900 Sobic002G362900 Sobic006G191100--Sobic002G362900 Sobic010G069900 Sobic010G069900 Sobic006G191100--Sobic010G069900 Sobic003G016600 Sobic003G016600 Sobic006G191100--Sobic003G016600 Sobic006G191100--Sobic003G227700 Sobic001G113700 Sobic001G113700 Sobic006G191100--Sobic001G113700 Sobic006G191100--Sobic007G221100 Sobic004G161900 Sobic004G161900 Sobic006G075600--Sobic004G161900 Sobic003G287400 Sobic003G287400 Sobic006G075600--Sobic003G287400 Sobic003G017601 Sobic003G017601 Sobic006G075600--Sobic003G017601 Sobic003G368000 Sobic003G368000 Sobic006G075600--Sobic003G368000 Sobic003G045900 Sobic003G045900 Sobic006G075600--Sobic003G045900 Sobic010G045400 Sobic010G045400 Sobic006G075600--Sobic010G045400 Sobic008G037900 Sobic008G037900 Sobic006G075600--Sobic008G037900 Sobic003G287450 Sobic003G287450 Sobic006G075600--Sobic003G287450 Sobic006G075600--Sobic007G221100 Sobic010G220600--Sobic010G161450 Sobic003G432100 Sobic003G432100 Sobic010G220600--Sobic003G432100 Sobic001G386400 Sobic001G386400 Sobic010G220600--Sobic001G386400 Sobic003G348800 Sobic003G348800 Sobic010G220600--Sobic003G348800 Sobic010G220600--Sobic007G221100 Sobic006G064800 Sobic006G064800 Sobic010G220600--Sobic006G064800 Sobic010G220600--Sobic003G273700 Sobic002G155400 Sobic002G155400 Sobic010G220600--Sobic002G155400 Sobic010G220600--Sobic010G192432
Octagon: transcription factors


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