Gene annotation
Transcriptome id Sobic.006G176600.2,Sobic.006G176600.1
Synonym ATBCAT-5
Functional annotation aminotransferase domain containing protein, putative, expressed
UniProt A0A1Z5REF8 , A0A1B6PMJ9
Pfam PF01063
Panther DB PTHR11825 PTHR11825:SF41 PTHR11825:SF41 PTHR11825
NCBI CDD KOG0975; Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily
KEGG Orthology K00826; E2.6.1.42, branched-chain amino acid aminotransferase
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity GO:0003824catalytic activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT5G65780 : branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5)
RAP-DB (Rice) LOC_Os04g47190.2 : aminotransferase domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT61640 , KQJ84014 , KQJ84013 , PNT61639
Barley HORVU2Hr1G096380.4 , HORVU2Hr1G096380.5 , HORVU2Hr1G096380.6 , HORVU2Hr1G096380.7 , HORVU2Hr1G096380.1 , HORVU2Hr1G096380.2 , HORVU2Hr1G096380.8 , HORVU2Hr1G096380.9 , HORVU2Hr1G096380.23 , HORVU2Hr1G096380.25 , HORVU2Hr1G096380.24 , HORVU2Hr1G096380.22 , HORVU2Hr1G096380.21 , HORVU2Hr1G096380.20 , HORVU2Hr1G096380.16 , HORVU2Hr1G096380.17 , HORVU2Hr1G096380.14 , HORVU2Hr1G096380.15 , HORVU2Hr1G096380.12 , HORVU2Hr1G096380.13 , HORVU2Hr1G096380.10 , HORVU2Hr1G096380.11 , HORVU2Hr1G096380.18 , HORVU2Hr1G096380.19
Wheat TraesCS2A02G407900 , TraesCS2B02G426100 , TraesCS2D02G405200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G294200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
2 Sobic.010G193900 N-terminal asparagine amidohydrolase, putative, expressed K14662: protein N-terminal asparagine amidohydrolase
3 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
4 Sobic.006G148200 glycosyl transferase 8 domain containing protein, putative, expressed -
5 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
6 Sobic.006G222100 dehydrogenase, putative, expressed -
7 Sobic.004G237600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
8 Sobic.007G136100 uncharacterized protein family UPF0016 domain containing protein, expressed -
9 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
10 Sobic.003G261400 DUF292 domain containing protein, expressed -
11 Sobic.010G000900 spotted leaf 11, putative, expressed -
12 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
13 Sobic.004G130900 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
14 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
15 Sobic.004G021300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.003G261500 lipase, putative, expressed -
17 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
18 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9
19 Sobic.009G179200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
20 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic006G176600 Sobic006G176600 Sobic002G294200 Sobic002G294200 Sobic006G176600--Sobic002G294200 Sobic010G193900 Sobic010G193900 Sobic006G176600--Sobic010G193900 Sobic010G002400 Sobic010G002400 Sobic006G176600--Sobic010G002400 Sobic006G148200 Sobic006G148200 Sobic006G176600--Sobic006G148200 Sobic001G049200 Sobic001G049200 Sobic006G176600--Sobic001G049200 Sobic006G222100 Sobic006G222100 Sobic006G176600--Sobic006G222100 Sobic004G237600 Sobic004G237600 Sobic006G176600--Sobic004G237600 Sobic007G136100 Sobic007G136100 Sobic006G176600--Sobic007G136100 Sobic003G012200 Sobic003G012200 Sobic006G176600--Sobic003G012200 Sobic002G242500 Sobic002G242500 Sobic002G294200--Sobic002G242500 Sobic004G274400 Sobic004G274400 Sobic002G294200--Sobic004G274400 Sobic009G179200 Sobic009G179200 Sobic002G294200--Sobic009G179200 Sobic001G283200 Sobic001G283200 Sobic002G294200--Sobic001G283200 Sobic002G294200--Sobic006G176600 Sobic002G294200--Sobic006G148200 Sobic002G294200--Sobic010G193900 Sobic006G281800 Sobic006G281800 Sobic002G294200--Sobic006G281800 Sobic010G064600 Sobic010G064600 Sobic002G294200--Sobic010G064600 Sobic010G193900--Sobic007G136100 Sobic010G193900--Sobic010G002400 Sobic010G193900--Sobic006G176600 Sobic010G193900--Sobic002G294200 Sobic004G173600 Sobic004G173600 Sobic010G193900--Sobic004G173600 Sobic002G114800 Sobic002G114800 Sobic010G193900--Sobic002G114800 Sobic004G081800 Sobic004G081800 Sobic010G193900--Sobic004G081800 Sobic010G193900--Sobic001G283200 Sobic010G193900--Sobic001G049200 Sobic003G338500 Sobic003G338500 Sobic010G002400--Sobic003G338500 Sobic004G275700 Sobic004G275700 Sobic010G002400--Sobic004G275700 Sobic001G201500 Sobic001G201500 Sobic010G002400--Sobic001G201500 Sobic010G002400--Sobic010G193900 Sobic005G155700 Sobic005G155700 Sobic010G002400--Sobic005G155700 Sobic010G223300 Sobic010G223300 Sobic010G002400--Sobic010G223300 Sobic002G308500 Sobic002G308500 Sobic010G002400--Sobic002G308500 Sobic010G002400--Sobic003G012200 Sobic010G002400--Sobic006G176600 Sobic006G148200--Sobic004G274400 Sobic001G085100 Sobic001G085100 Sobic006G148200--Sobic001G085100 Sobic006G034000 Sobic006G034000 Sobic006G148200--Sobic006G034000 Sobic001G323000 Sobic001G323000 Sobic006G148200--Sobic001G323000 Sobic009G228700 Sobic009G228700 Sobic006G148200--Sobic009G228700 Sobic001G033500 Sobic001G033500 Sobic006G148200--Sobic001G033500 Sobic001G206900 Sobic001G206900 Sobic006G148200--Sobic001G206900 Sobic010G000900 Sobic010G000900 Sobic006G148200--Sobic010G000900 Sobic001G048700 Sobic001G048700 Sobic006G148200--Sobic001G048700 Sobic001G049200--Sobic009G179200 Sobic001G049200--Sobic002G114800 Sobic010G161450 Sobic010G161450 Sobic001G049200--Sobic010G161450 Sobic001G049200--Sobic002G242500 Sobic007G221100 Sobic007G221100 Sobic001G049200--Sobic007G221100 Sobic001G049200--Sobic002G294200 Sobic004G132300 Sobic004G132300 Sobic001G049200--Sobic004G132300 Sobic001G049200--Sobic006G176600 Sobic007G098400 Sobic007G098400 Sobic001G049200--Sobic007G098400 Sobic006G222100--Sobic006G176600 Sobic005G044800 Sobic005G044800 Sobic006G222100--Sobic005G044800 Sobic006G222100--Sobic010G193900 Sobic003G273600 Sobic003G273600 Sobic006G222100--Sobic003G273600 Sobic010G123400 Sobic010G123400 Sobic006G222100--Sobic010G123400 Sobic006G239800 Sobic006G239800 Sobic006G222100--Sobic006G239800 Sobic006G244700 Sobic006G244700 Sobic006G222100--Sobic006G244700 Sobic002G361300 Sobic002G361300 Sobic006G222100--Sobic002G361300 Sobic003G299000 Sobic003G299000 Sobic006G222100--Sobic003G299000 Sobic001G123000 Sobic001G123000 Sobic004G237600--Sobic001G123000 Sobic001G180900 Sobic001G180900 Sobic004G237600--Sobic001G180900 Sobic004G237600--Sobic006G176600 Sobic004G237600--Sobic006G034000 Sobic004G237600--Sobic006G148200 Sobic004G234900 Sobic004G234900 Sobic004G237600--Sobic004G234900 Sobic004G237600--Sobic002G361300 Sobic006G225600 Sobic006G225600 Sobic004G237600--Sobic006G225600 Sobic004G237600--Sobic001G323000 Sobic007G136100--Sobic001G283200 Sobic007G136100--Sobic010G193900 Sobic003G055700 Sobic003G055700 Sobic007G136100--Sobic003G055700 Sobic003G261400 Sobic003G261400 Sobic007G136100--Sobic003G261400 Sobic003G372000 Sobic003G372000 Sobic007G136100--Sobic003G372000 Sobic007G136100--Sobic004G081800 Sobic003G261500 Sobic003G261500 Sobic007G136100--Sobic003G261500 Sobic007G136100--Sobic006G176600 Sobic007G136100--Sobic001G049200 Sobic001G199100 Sobic001G199100 Sobic003G012200--Sobic001G199100 Sobic003G344900 Sobic003G344900 Sobic003G012200--Sobic003G344900 Sobic003G012200--Sobic010G000900 Sobic003G012200--Sobic001G085100 Sobic004G348300 Sobic004G348300 Sobic003G012200--Sobic004G348300 Sobic009G075800 Sobic009G075800 Sobic003G012200--Sobic009G075800 Sobic003G012200--Sobic004G275700 Sobic009G259400 Sobic009G259400 Sobic003G012200--Sobic009G259400 Sobic001G047400 Sobic001G047400 Sobic003G012200--Sobic001G047400
Octagon: transcription factors


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