Gene annotation
Transcriptome id Sobic.003G261400.5,Sobic.003G261400.6,Sobic.003G261400.4
Synonym Sb03g031550
Functional annotation DUF292 domain containing protein, expressed
UniProt A0A1B6Q5G1
Pfam PF03398
Panther DB PTHR12161 PTHR12161:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G25420 : Regulator of Vps4 activity in the MVB pathway protein
RAP-DB (Rice) LOC_Os01g49350.1 : DUF292 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a027985
Brachypodium KQK09246
Barley HORVU3Hr1G063860.8 , HORVU3Hr1G063860.4 , HORVU3Hr1G063860.5 , HORVU3Hr1G063860.6 , HORVU3Hr1G063860.7 , HORVU3Hr1G063860.1 , HORVU3Hr1G063860.2 , HORVU3Hr1G063860.3
Wheat TraesCS3B02G296700 , TraesCS3D02G263400 , TraesCS3A02G263500
Populus -


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cDNA sequences
Sobic.003G261400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9
2 Sobic.002G281300 trafficking protein particle complex subunit, putative, expressed -
3 Sobic.003G261500 lipase, putative, expressed -
4 Sobic.007G045600 MSP domain containing protein, expressed -
5 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
6 Sobic.004G130900 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
7 Sobic.003G124800 26S proteasome non-ATPase regulatory subunit 14, putative, expressed K03030: PSMD14, RPN11, 26S proteasome regulatory subunit N11
8 Sobic.001G051200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
K08515: vesicle-associated membrane protein 7
9 Sobic.010G000900 spotted leaf 11, putative, expressed -
10 Sobic.007G168600 vesicle-associated membrane protein 727, putative, expressed K08511: vesicle-associated membrane protein 72
11 Sobic.001G078800 similar to Serine/threonine-protein kinase SAPK8(PubMedID : 29862293)@CAMK_CAMK_like.22 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
12 Sobic.004G081800 Ubiquitin family domain containing protein, expressed K11885: DNA damage-inducible protein 1
13 Sobic.001G085100 expressed protein -
14 Sobic.004G212200 enhancer of rudimentary protein, putative, expressed -
15 Sobic.010G205300 secreted salivary protein, putative, expressed -
16 Sobic.007G142500 EF hand family protein, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
17 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
18 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
19 Sobic.001G047400 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
20 Sobic.002G033400 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase


Gene co-expression network
sample Sobic003G261400 Sobic003G261400 Sobic001G283200 Sobic001G283200 Sobic003G261400--Sobic001G283200 Sobic002G281300 Sobic002G281300 Sobic003G261400--Sobic002G281300 Sobic003G261500 Sobic003G261500 Sobic003G261400--Sobic003G261500 Sobic007G045600 Sobic007G045600 Sobic003G261400--Sobic007G045600 Sobic001G458700 Sobic001G458700 Sobic003G261400--Sobic001G458700 Sobic004G130900 Sobic004G130900 Sobic003G261400--Sobic004G130900 Sobic003G124800 Sobic003G124800 Sobic003G261400--Sobic003G124800 Sobic001G051200 Sobic001G051200 Sobic003G261400--Sobic001G051200 Sobic010G000900 Sobic010G000900 Sobic003G261400--Sobic010G000900 Sobic001G283200--Sobic001G458700 Sobic001G283200--Sobic003G261400 Sobic006G252200 Sobic006G252200 Sobic001G283200--Sobic006G252200 Sobic001G033500 Sobic001G033500 Sobic001G283200--Sobic001G033500 Sobic004G348900 Sobic004G348900 Sobic001G283200--Sobic004G348900 Sobic004G181900 Sobic004G181900 Sobic001G283200--Sobic004G181900 Sobic003G349300 Sobic003G349300 Sobic001G283200--Sobic003G349300 Sobic007G176200 Sobic007G176200 Sobic001G283200--Sobic007G176200 Sobic004G082900 Sobic004G082900 Sobic001G283200--Sobic004G082900 Sobic002G281300--Sobic003G261400 Sobic006G250900 Sobic006G250900 Sobic002G281300--Sobic006G250900 Sobic003G007500 Sobic003G007500 Sobic002G281300--Sobic003G007500 Sobic001G067900 Sobic001G067900 Sobic002G281300--Sobic001G067900 Sobic010G205300 Sobic010G205300 Sobic002G281300--Sobic010G205300 Sobic001G388200 Sobic001G388200 Sobic002G281300--Sobic001G388200 Sobic004G194900 Sobic004G194900 Sobic002G281300--Sobic004G194900 Sobic001G054200 Sobic001G054200 Sobic002G281300--Sobic001G054200 Sobic002G281300--Sobic003G349300 Sobic003G261500--Sobic003G261400 Sobic003G217400 Sobic003G217400 Sobic003G261500--Sobic003G217400 Sobic003G261500--Sobic010G000900 Sobic003G261500--Sobic001G283200 Sobic007G168600 Sobic007G168600 Sobic003G261500--Sobic007G168600 Sobic003G261500--Sobic001G051200 Sobic004G212200 Sobic004G212200 Sobic003G261500--Sobic004G212200 Sobic003G261500--Sobic003G124800 Sobic004G086600 Sobic004G086600 Sobic003G261500--Sobic004G086600 Sobic007G114200 Sobic007G114200 Sobic007G045600--Sobic007G114200 Sobic007G019100 Sobic007G019100 Sobic007G045600--Sobic007G019100 Sobic007G045600--Sobic003G124800 Sobic006G232200 Sobic006G232200 Sobic007G045600--Sobic006G232200 Sobic007G045600--Sobic003G261400 Sobic007G142500 Sobic007G142500 Sobic007G045600--Sobic007G142500 Sobic007G045600--Sobic004G086600 Sobic001G461900 Sobic001G461900 Sobic007G045600--Sobic001G461900 Sobic007G118000 Sobic007G118000 Sobic007G045600--Sobic007G118000 Sobic001G458700--Sobic007G176200 Sobic001G458700--Sobic006G252200 Sobic001G010700 Sobic001G010700 Sobic001G458700--Sobic001G010700 Sobic002G341800 Sobic002G341800 Sobic001G458700--Sobic002G341800 Sobic004G224900 Sobic004G224900 Sobic001G458700--Sobic004G224900 Sobic003G330500 Sobic003G330500 Sobic001G458700--Sobic003G330500 Sobic001G458700--Sobic001G283200 Sobic001G502200 Sobic001G502200 Sobic001G458700--Sobic001G502200 Sobic004G081800 Sobic004G081800 Sobic001G458700--Sobic004G081800 Sobic002G400000 Sobic002G400000 Sobic004G130900--Sobic002G400000 Sobic004G327300 Sobic004G327300 Sobic004G130900--Sobic004G327300 Sobic004G130900--Sobic003G261400 Sobic003G367451 Sobic003G367451 Sobic004G130900--Sobic003G367451 Sobic001G005900 Sobic001G005900 Sobic004G130900--Sobic001G005900 Sobic007G096700 Sobic007G096700 Sobic004G130900--Sobic007G096700 Sobic009G198500 Sobic009G198500 Sobic004G130900--Sobic009G198500 Sobic004G130900--Sobic010G000900 Sobic004G130900--Sobic007G168600 Sobic003G124800--Sobic009G198500 Sobic001G439600 Sobic001G439600 Sobic003G124800--Sobic001G439600 Sobic003G124800--Sobic006G232200 Sobic003G124800--Sobic001G502200 Sobic003G124800--Sobic007G045600 Sobic001G529000 Sobic001G529000 Sobic003G124800--Sobic001G529000 Sobic003G124800--Sobic007G168600 Sobic006G150600 Sobic006G150600 Sobic003G124800--Sobic006G150600 Sobic004G066800 Sobic004G066800 Sobic003G124800--Sobic004G066800 Sobic003G015900 Sobic003G015900 Sobic001G051200--Sobic003G015900 Sobic001G051200--Sobic003G007500 Sobic001G051200--Sobic003G261400 Sobic001G047400 Sobic001G047400 Sobic001G051200--Sobic001G047400 Sobic001G051200--Sobic010G000900 Sobic001G051200--Sobic007G168600 Sobic010G058500 Sobic010G058500 Sobic001G051200--Sobic010G058500 Sobic001G051200--Sobic002G400000 Sobic010G168600 Sobic010G168600 Sobic001G051200--Sobic010G168600 Sobic010G000900--Sobic002G400000 Sobic003G012200 Sobic003G012200 Sobic010G000900--Sobic003G012200 Sobic010G000900--Sobic001G047400 Sobic010G000900--Sobic003G261400 Sobic010G000900--Sobic004G130900 Sobic010G000900--Sobic001G051200 Sobic001G323000 Sobic001G323000 Sobic010G000900--Sobic001G323000 Sobic010G000900--Sobic001G388200 Sobic001G085100 Sobic001G085100 Sobic010G000900--Sobic001G085100
Octagon: transcription factors


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