Hb_128912_010

Information

Type -
Description -
Location Contig128912: 258-680
Sequence    

Annotation

kegg
ID fve:101314254
description uncharacterized protein LOC101314254
nr
ID XP_012073438.1
description PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUC3
description JHL06P13.14 protein OS=Jatropha curcas GN=JHL06P13.14 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_128912_010 0.0 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
2 Hb_150643_010 0.105570099 - - lipid binding protein, putative [Ricinus communis]
3 Hb_047690_010 0.1076930674 - - Phosphoprotein phosphatase [Theobroma cacao]
4 Hb_135811_020 0.111475341 - - hypothetical protein JCGZ_19965 [Jatropha curcas]
5 Hb_001487_020 0.1214068795 - - PREDICTED: probable sulfate transporter 3.5 isoform X1 [Jatropha curcas]
6 Hb_000532_060 0.1337953509 - - copper-transporting atpase p-type, putative [Ricinus communis]
7 Hb_007785_020 0.1374877089 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
8 Hb_001080_040 0.1394834605 - - cytochrome P450, putative [Ricinus communis]
9 Hb_002019_030 0.1408537126 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
10 Hb_003253_060 0.1409748165 - - PREDICTED: tropinone reductase-like 1 [Vitis vinifera]
11 Hb_046117_050 0.1424511498 transcription factor TF Family: C2H2 hypothetical protein POPTR_0009s14590g [Populus trichocarpa]
12 Hb_000345_190 0.1462906716 transcription factor TF Family: C2H2 hypothetical protein POPTR_0005s02730g [Populus trichocarpa]
13 Hb_006418_010 0.15033125 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
14 Hb_012055_100 0.1510987499 - - heat shock protein 70 (HSP70)-interacting protein, putative [Ricinus communis]
15 Hb_045810_010 0.152094837 - - PREDICTED: laccase-12-like [Jatropha curcas]
16 Hb_005396_100 0.1523552059 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001903_020 0.1560945415 - - -
18 Hb_004656_020 0.1564085113 - - EF hand domain-containing protein, variant [Neurospora crassa OR74A]
19 Hb_000535_030 0.1584420859 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
20 Hb_003376_340 0.1585780263 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_128912_010 Hb_128912_010 Hb_150643_010 Hb_150643_010 Hb_128912_010--Hb_150643_010 Hb_047690_010 Hb_047690_010 Hb_128912_010--Hb_047690_010 Hb_135811_020 Hb_135811_020 Hb_128912_010--Hb_135811_020 Hb_001487_020 Hb_001487_020 Hb_128912_010--Hb_001487_020 Hb_000532_060 Hb_000532_060 Hb_128912_010--Hb_000532_060 Hb_007785_020 Hb_007785_020 Hb_128912_010--Hb_007785_020 Hb_150643_010--Hb_047690_010 Hb_150643_010--Hb_001487_020 Hb_150643_010--Hb_135811_020 Hb_003253_060 Hb_003253_060 Hb_150643_010--Hb_003253_060 Hb_046117_050 Hb_046117_050 Hb_150643_010--Hb_046117_050 Hb_150643_010--Hb_007785_020 Hb_047690_010--Hb_001487_020 Hb_047690_010--Hb_135811_020 Hb_047690_010--Hb_003253_060 Hb_004656_020 Hb_004656_020 Hb_047690_010--Hb_004656_020 Hb_047690_010--Hb_046117_050 Hb_135811_020--Hb_001487_020 Hb_135811_020--Hb_003253_060 Hb_135811_020--Hb_046117_050 Hb_000535_030 Hb_000535_030 Hb_135811_020--Hb_000535_030 Hb_001487_020--Hb_003253_060 Hb_001487_020--Hb_046117_050 Hb_005081_080 Hb_005081_080 Hb_001487_020--Hb_005081_080 Hb_000345_190 Hb_000345_190 Hb_000532_060--Hb_000345_190 Hb_000170_230 Hb_000170_230 Hb_000532_060--Hb_000170_230 Hb_000532_060--Hb_046117_050 Hb_003376_340 Hb_003376_340 Hb_000532_060--Hb_003376_340 Hb_000532_060--Hb_150643_010 Hb_000532_060--Hb_001487_020 Hb_045810_010 Hb_045810_010 Hb_007785_020--Hb_045810_010 Hb_002067_110 Hb_002067_110 Hb_007785_020--Hb_002067_110 Hb_000844_020 Hb_000844_020 Hb_007785_020--Hb_000844_020 Hb_001331_050 Hb_001331_050 Hb_007785_020--Hb_001331_050 Hb_066262_020 Hb_066262_020 Hb_007785_020--Hb_066262_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.25677 0 0.126414 0.071557 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.956615 0

CAGE analysis