Hb_119858_010

Information

Type -
Description -
Location Contig119858: 12-335
Sequence    

Annotation

kegg
ID rcu:RCOM_1113060
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:1.3.1.74)
nr
ID XP_002531725.1
description leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T0F6
description Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis GN=RCOM_1113060 PE=4 SV=1
Gene Ontology
ID GO:0003824
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_119858_010 0.0 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
2 Hb_002121_060 0.0013579978 - - -
3 Hb_005511_110 0.0027142763 - - -
4 Hb_000295_070 0.0040486094 - - polyprotein [Oryza australiensis]
5 Hb_146757_010 0.006642189 - - -
6 Hb_029344_010 0.0103322594 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
7 Hb_054511_010 0.0106436591 - - Uncharacterized protein TCM_004340 [Theobroma cacao]
8 Hb_141689_020 0.0131636001 - - -
9 Hb_001227_050 0.0157151098 - - -
10 Hb_020367_060 0.0157151098 - - hypothetical protein POPTR_0005s15010g [Populus trichocarpa]
11 Hb_062634_010 0.0202588004 - - PREDICTED: uncharacterized protein LOC105636643 [Jatropha curcas]
12 Hb_001755_010 0.0209140541 - - PREDICTED: uncharacterized protein LOC105767245 [Gossypium raimondii]
13 Hb_085603_010 0.0218836737 - - PREDICTED: uncharacterized protein LOC101296995 [Fragaria vesca subsp. vesca]
14 Hb_186580_020 0.0255442657 - - PREDICTED: uncharacterized protein LOC103426965 [Malus domestica]
15 Hb_174258_010 0.0272226755 - - PREDICTED: uncharacterized protein LOC105631548 [Jatropha curcas]
16 Hb_027970_010 0.0281205403 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
17 Hb_002189_020 0.029308528 - - conserved hypothetical protein [Ricinus communis]
18 Hb_060997_010 0.029308528 - - PREDICTED: uncharacterized protein LOC105789525 [Gossypium raimondii]
19 Hb_000698_050 0.0303205475 - - -
20 Hb_001821_040 0.0315072197 - - -

Gene co-expression network

sample Hb_119858_010 Hb_119858_010 Hb_002121_060 Hb_002121_060 Hb_119858_010--Hb_002121_060 Hb_005511_110 Hb_005511_110 Hb_119858_010--Hb_005511_110 Hb_000295_070 Hb_000295_070 Hb_119858_010--Hb_000295_070 Hb_146757_010 Hb_146757_010 Hb_119858_010--Hb_146757_010 Hb_029344_010 Hb_029344_010 Hb_119858_010--Hb_029344_010 Hb_054511_010 Hb_054511_010 Hb_119858_010--Hb_054511_010 Hb_002121_060--Hb_005511_110 Hb_002121_060--Hb_000295_070 Hb_002121_060--Hb_146757_010 Hb_002121_060--Hb_054511_010 Hb_002121_060--Hb_029344_010 Hb_005511_110--Hb_000295_070 Hb_005511_110--Hb_054511_010 Hb_005511_110--Hb_146757_010 Hb_141689_020 Hb_141689_020 Hb_005511_110--Hb_141689_020 Hb_000295_070--Hb_146757_010 Hb_000295_070--Hb_029344_010 Hb_001227_050 Hb_001227_050 Hb_000295_070--Hb_001227_050 Hb_146757_010--Hb_029344_010 Hb_146757_010--Hb_001227_050 Hb_020367_060 Hb_020367_060 Hb_146757_010--Hb_020367_060 Hb_029344_010--Hb_001227_050 Hb_029344_010--Hb_020367_060 Hb_062634_010 Hb_062634_010 Hb_029344_010--Hb_062634_010 Hb_054511_010--Hb_141689_020 Hb_001755_010 Hb_001755_010 Hb_054511_010--Hb_001755_010 Hb_054511_010--Hb_000295_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.11138 0.393413

CAGE analysis