Hb_043302_010

Information

Type -
Description -
Location Contig43302: 1294-1782
Sequence    

Annotation

kegg
ID rcu:RCOM_0797250
description ADP,ATP carrier protein, putative
nr
ID XP_002516425.1
description ADP,ATP carrier protein, putative [Ricinus communis]
swissprot
ID Q9FM86
description Probable ADP,ATP carrier protein At5g56450 OS=Arabidopsis thaliana GN=At5g56450 PE=2 SV=1
trembl
ID B9RRQ6
description ADP,ATP carrier protein, putative OS=Ricinus communis GN=RCOM_0797250 PE=3 SV=1
Gene Ontology
ID GO:0005743
description probable carrier protein at5g56450

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_043302_010 0.0 - - ADP,ATP carrier protein, putative [Ricinus communis]
2 Hb_011828_050 0.0537991122 - - 40S ribosomal protein S23, putative [Ricinus communis]
3 Hb_003746_040 0.0767277157 - - PREDICTED: protein N-terminal glutamine amidohydrolase [Jatropha curcas]
4 Hb_009767_120 0.0819163805 - - PREDICTED: probable prefoldin subunit 2 [Jatropha curcas]
5 Hb_000690_080 0.0860940486 transcription factor TF Family: HB -
6 Hb_004204_200 0.0885664409 - - PREDICTED: LYR motif-containing protein 4 [Jatropha curcas]
7 Hb_004944_010 0.0911525002 - - small nuclear ribonucleoprotein E [Hevea brasiliensis]
8 Hb_010128_130 0.0912233459 - - PREDICTED: G patch domain-containing protein 8 isoform X1 [Jatropha curcas]
9 Hb_001741_140 0.1009349316 - - PREDICTED: 60S ribosomal protein L7-2-like [Jatropha curcas]
10 Hb_003874_020 0.1026535124 - - hypothetical protein POPTR_0012s02280g [Populus trichocarpa]
11 Hb_002659_070 0.1034815781 - - PREDICTED: RNA-binding protein 24-A [Jatropha curcas]
12 Hb_000977_130 0.1041241741 - - PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Populus euphratica]
13 Hb_000933_180 0.1047604995 - - PREDICTED: chorismate mutase 3, chloroplastic [Jatropha curcas]
14 Hb_000742_140 0.1054827057 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000107_050 0.1072442578 - - 60S ribosomal protein L9, putative [Ricinus communis]
16 Hb_001047_100 0.1074707038 - - 40S ribosomal protein S18, putative [Ricinus communis]
17 Hb_000349_060 0.1078822004 - - PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera]
18 Hb_114343_010 0.1094686136 - - PREDICTED: uncharacterized protein LOC105647831 [Jatropha curcas]
19 Hb_141131_010 0.1096599578 - - Diphthamide biosynthesis protein, putative [Ricinus communis]
20 Hb_002997_170 0.1100451514 - - PREDICTED: uncharacterized protein LOC105131887 [Populus euphratica]

Gene co-expression network

sample Hb_043302_010 Hb_043302_010 Hb_011828_050 Hb_011828_050 Hb_043302_010--Hb_011828_050 Hb_003746_040 Hb_003746_040 Hb_043302_010--Hb_003746_040 Hb_009767_120 Hb_009767_120 Hb_043302_010--Hb_009767_120 Hb_000690_080 Hb_000690_080 Hb_043302_010--Hb_000690_080 Hb_004204_200 Hb_004204_200 Hb_043302_010--Hb_004204_200 Hb_004944_010 Hb_004944_010 Hb_043302_010--Hb_004944_010 Hb_011828_050--Hb_009767_120 Hb_011828_050--Hb_003746_040 Hb_011828_050--Hb_004944_010 Hb_000742_140 Hb_000742_140 Hb_011828_050--Hb_000742_140 Hb_003874_020 Hb_003874_020 Hb_011828_050--Hb_003874_020 Hb_001047_100 Hb_001047_100 Hb_003746_040--Hb_001047_100 Hb_010128_130 Hb_010128_130 Hb_003746_040--Hb_010128_130 Hb_105386_010 Hb_105386_010 Hb_003746_040--Hb_105386_010 Hb_000290_020 Hb_000290_020 Hb_003746_040--Hb_000290_020 Hb_000933_180 Hb_000933_180 Hb_009767_120--Hb_000933_180 Hb_009767_120--Hb_003874_020 Hb_009767_120--Hb_000690_080 Hb_011360_140 Hb_011360_140 Hb_009767_120--Hb_011360_140 Hb_001369_650 Hb_001369_650 Hb_009767_120--Hb_001369_650 Hb_000690_080--Hb_004944_010 Hb_000977_130 Hb_000977_130 Hb_000690_080--Hb_000977_130 Hb_000107_050 Hb_000107_050 Hb_000690_080--Hb_000107_050 Hb_141131_010 Hb_141131_010 Hb_000690_080--Hb_141131_010 Hb_000690_080--Hb_003874_020 Hb_000749_150 Hb_000749_150 Hb_004204_200--Hb_000749_150 Hb_001741_140 Hb_001741_140 Hb_004204_200--Hb_001741_140 Hb_004204_200--Hb_010128_130 Hb_001221_230 Hb_001221_230 Hb_004204_200--Hb_001221_230 Hb_000905_190 Hb_000905_190 Hb_004204_200--Hb_000905_190 Hb_000349_060 Hb_000349_060 Hb_004204_200--Hb_000349_060 Hb_004944_010--Hb_000349_060 Hb_004944_010--Hb_141131_010 Hb_000457_110 Hb_000457_110 Hb_004944_010--Hb_000457_110 Hb_004944_010--Hb_003874_020 Hb_003038_030 Hb_003038_030 Hb_004944_010--Hb_003038_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.63689 1.25199 1.97914 2.96775 6.8718 9.64103
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.12504 9.59584 2.89064 1.93751 1.59192

CAGE analysis