Hb_011867_010

Information

Type -
Description -
Location Contig11867: 66995-72356
Sequence    

Annotation

kegg
ID tcc:TCM_011299
description Uncharacterized protein isoform 1
nr
ID XP_012081334.1
description PREDICTED: uncharacterized protein LOC105641409 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K1K4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18589 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05544: 66987-72336 , PASA_asmbl_05545: 67022-72358
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011867_010 0.0 - - PREDICTED: uncharacterized protein LOC105641409 [Jatropha curcas]
2 Hb_006031_020 0.0693157008 - - PREDICTED: protein FLX-like 1 isoform X1 [Jatropha curcas]
3 Hb_000069_110 0.0780996433 - - PREDICTED: nephrocystin-3-like isoform X2 [Jatropha curcas]
4 Hb_002609_020 0.083879344 - - PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like [Jatropha curcas]
5 Hb_001703_030 0.084619971 transcription factor TF Family: SET Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative [Ricinus communis]
6 Hb_000270_270 0.0858341707 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH79-like isoform X1 [Jatropha curcas]
7 Hb_000479_010 0.0879448967 - - PREDICTED: 40S ribosomal protein S19-3-like [Eucalyptus grandis]
8 Hb_012799_180 0.0900336299 - - PREDICTED: probable receptor-like protein kinase At1g11050 [Vitis vinifera]
9 Hb_007416_030 0.0909015496 - - PREDICTED: transcription initiation factor TFIID subunit 10 [Jatropha curcas]
10 Hb_004735_040 0.0912109393 - - PREDICTED: GTP-binding nuclear protein Ran1A-like [Jatropha curcas]
11 Hb_001821_010 0.0926286721 - - PREDICTED: uncharacterized protein C9orf78 [Jatropha curcas]
12 Hb_005834_020 0.0938950319 - - PREDICTED: BTB/POZ domain-containing protein At1g30440 isoform X1 [Jatropha curcas]
13 Hb_153112_020 0.0943067338 - - PREDICTED: mediator of RNA polymerase II transcription subunit 22b-like [Jatropha curcas]
14 Hb_003050_080 0.0947129656 - - 40S ribosomal protein S14, putative [Ricinus communis]
15 Hb_000056_200 0.09508151 - - 40S ribosomal S9-2 -like protein [Gossypium arboreum]
16 Hb_004994_100 0.0954446621 - - acyl-CoA thioesterase, putative [Ricinus communis]
17 Hb_002928_130 0.0958384622 - - PREDICTED: small nuclear ribonucleoprotein Sm D3 [Jatropha curcas]
18 Hb_000608_370 0.0962983365 - - acyl-carrier-protein [Triadica sebifera]
19 Hb_002006_020 0.0965322224 - - PREDICTED: uncharacterized protein LOC105650638 [Jatropha curcas]
20 Hb_001629_110 0.0966098237 - - PREDICTED: uncharacterized protein LOC105632808 [Jatropha curcas]

Gene co-expression network

sample Hb_011867_010 Hb_011867_010 Hb_006031_020 Hb_006031_020 Hb_011867_010--Hb_006031_020 Hb_000069_110 Hb_000069_110 Hb_011867_010--Hb_000069_110 Hb_002609_020 Hb_002609_020 Hb_011867_010--Hb_002609_020 Hb_001703_030 Hb_001703_030 Hb_011867_010--Hb_001703_030 Hb_000270_270 Hb_000270_270 Hb_011867_010--Hb_000270_270 Hb_000479_010 Hb_000479_010 Hb_011867_010--Hb_000479_010 Hb_002226_070 Hb_002226_070 Hb_006031_020--Hb_002226_070 Hb_002183_090 Hb_002183_090 Hb_006031_020--Hb_002183_090 Hb_000059_370 Hb_000059_370 Hb_006031_020--Hb_000059_370 Hb_007416_030 Hb_007416_030 Hb_006031_020--Hb_007416_030 Hb_002686_020 Hb_002686_020 Hb_006031_020--Hb_002686_020 Hb_011316_040 Hb_011316_040 Hb_000069_110--Hb_011316_040 Hb_000069_110--Hb_002609_020 Hb_132835_010 Hb_132835_010 Hb_000069_110--Hb_132835_010 Hb_001277_330 Hb_001277_330 Hb_000069_110--Hb_001277_330 Hb_000510_320 Hb_000510_320 Hb_000069_110--Hb_000510_320 Hb_004735_040 Hb_004735_040 Hb_002609_020--Hb_004735_040 Hb_001821_010 Hb_001821_010 Hb_002609_020--Hb_001821_010 Hb_009838_080 Hb_009838_080 Hb_002609_020--Hb_009838_080 Hb_000056_200 Hb_000056_200 Hb_002609_020--Hb_000056_200 Hb_000243_030 Hb_000243_030 Hb_002609_020--Hb_000243_030 Hb_002609_020--Hb_002226_070 Hb_000046_280 Hb_000046_280 Hb_001703_030--Hb_000046_280 Hb_012799_180 Hb_012799_180 Hb_001703_030--Hb_012799_180 Hb_001703_030--Hb_009838_080 Hb_001703_030--Hb_132835_010 Hb_017904_010 Hb_017904_010 Hb_001703_030--Hb_017904_010 Hb_153112_020 Hb_153112_020 Hb_000270_270--Hb_153112_020 Hb_000684_090 Hb_000684_090 Hb_000270_270--Hb_000684_090 Hb_002205_080 Hb_002205_080 Hb_000270_270--Hb_002205_080 Hb_002874_190 Hb_002874_190 Hb_000270_270--Hb_002874_190 Hb_004931_090 Hb_004931_090 Hb_000270_270--Hb_004931_090 Hb_000331_080 Hb_000331_080 Hb_000270_270--Hb_000331_080 Hb_001140_060 Hb_001140_060 Hb_000479_010--Hb_001140_060 Hb_008300_010 Hb_008300_010 Hb_000479_010--Hb_008300_010 Hb_012753_160 Hb_012753_160 Hb_000479_010--Hb_012753_160 Hb_000479_010--Hb_006031_020 Hb_021409_030 Hb_021409_030 Hb_000479_010--Hb_021409_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.0967 7.74567 12.2716 8.05843 27.943 18.0543
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
19.9024 38.0841 29.8027 8.27628 12.1931

CAGE analysis