Hb_009265_070

Information

Type -
Description -
Location Contig9265: 103178-107475
Sequence    

Annotation

kegg
ID rcu:RCOM_0342700
description hypothetical protein
nr
ID XP_012091714.1
description PREDICTED: uncharacterized protein LOC105649623 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JBA1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21518 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62713: 103223-105091 , PASA_asmbl_62715: 103306-103769
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009265_070 0.0 - - PREDICTED: uncharacterized protein LOC105649623 isoform X1 [Jatropha curcas]
2 Hb_002701_020 0.0808114621 - - PREDICTED: transcription factor BIM2 [Jatropha curcas]
3 Hb_000988_080 0.0871523553 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
4 Hb_000690_180 0.0900993796 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 13 homolog B [Jatropha curcas]
5 Hb_004545_060 0.0932436179 - - PREDICTED: trafficking protein particle complex subunit 6B [Jatropha curcas]
6 Hb_003055_120 0.0937598452 - - Protein C20orf11, putative [Ricinus communis]
7 Hb_004032_010 0.0977783076 - - PREDICTED: uncharacterized protein LOC105635123 [Jatropha curcas]
8 Hb_002301_060 0.1001810493 - - hypothetical protein JCGZ_21483 [Jatropha curcas]
9 Hb_168000_010 0.1007698159 - - Calcium-dependent lipid-binding family protein isoform 2 [Theobroma cacao]
10 Hb_009557_070 0.1008663289 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000056_200 0.1018171683 - - 40S ribosomal S9-2 -like protein [Gossypium arboreum]
12 Hb_000045_090 0.1018985131 - - PREDICTED: syntaxin-31 [Jatropha curcas]
13 Hb_002232_100 0.1021823596 - - vacuolar ATPase F subunit [Hevea brasiliensis]
14 Hb_000656_170 0.1036495741 - - lsm1, putative [Ricinus communis]
15 Hb_002375_070 0.1043933993 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001538_090 0.1051607928 - - 40S ribosomal protein S29 [Morus notabilis]
17 Hb_003671_020 0.1052772332 - - calcineurin B, putative [Ricinus communis]
18 Hb_005686_060 0.1057085957 - - PREDICTED: uncharacterized protein LOC101508199 [Cicer arietinum]
19 Hb_000656_040 0.1066544476 - - PREDICTED: 25.3 kDa vesicle transport protein [Jatropha curcas]
20 Hb_003929_250 0.1067574842 - - PREDICTED: proteasome assembly chaperone 4 [Jatropha curcas]

Gene co-expression network

sample Hb_009265_070 Hb_009265_070 Hb_002701_020 Hb_002701_020 Hb_009265_070--Hb_002701_020 Hb_000988_080 Hb_000988_080 Hb_009265_070--Hb_000988_080 Hb_000690_180 Hb_000690_180 Hb_009265_070--Hb_000690_180 Hb_004545_060 Hb_004545_060 Hb_009265_070--Hb_004545_060 Hb_003055_120 Hb_003055_120 Hb_009265_070--Hb_003055_120 Hb_004032_010 Hb_004032_010 Hb_009265_070--Hb_004032_010 Hb_002835_080 Hb_002835_080 Hb_002701_020--Hb_002835_080 Hb_000227_080 Hb_000227_080 Hb_002701_020--Hb_000227_080 Hb_003929_250 Hb_003929_250 Hb_002701_020--Hb_003929_250 Hb_000428_050 Hb_000428_050 Hb_002701_020--Hb_000428_050 Hb_000056_200 Hb_000056_200 Hb_002701_020--Hb_000056_200 Hb_000988_080--Hb_003055_120 Hb_006541_030 Hb_006541_030 Hb_000988_080--Hb_006541_030 Hb_006922_110 Hb_006922_110 Hb_000988_080--Hb_006922_110 Hb_000510_320 Hb_000510_320 Hb_000988_080--Hb_000510_320 Hb_000988_080--Hb_000056_200 Hb_000690_180--Hb_004032_010 Hb_001369_640 Hb_001369_640 Hb_000690_180--Hb_001369_640 Hb_002226_070 Hb_002226_070 Hb_000690_180--Hb_002226_070 Hb_005045_060 Hb_005045_060 Hb_000690_180--Hb_005045_060 Hb_000690_180--Hb_003929_250 Hb_000690_180--Hb_000056_200 Hb_010180_020 Hb_010180_020 Hb_004545_060--Hb_010180_020 Hb_000045_090 Hb_000045_090 Hb_004545_060--Hb_000045_090 Hb_002078_150 Hb_002078_150 Hb_004545_060--Hb_002078_150 Hb_000103_560 Hb_000103_560 Hb_004545_060--Hb_000103_560 Hb_141131_010 Hb_141131_010 Hb_004545_060--Hb_141131_010 Hb_003038_030 Hb_003038_030 Hb_004545_060--Hb_003038_030 Hb_002874_190 Hb_002874_190 Hb_003055_120--Hb_002874_190 Hb_003687_110 Hb_003687_110 Hb_003055_120--Hb_003687_110 Hb_012762_050 Hb_012762_050 Hb_003055_120--Hb_012762_050 Hb_005539_350 Hb_005539_350 Hb_003055_120--Hb_005539_350 Hb_011381_100 Hb_011381_100 Hb_003055_120--Hb_011381_100 Hb_004032_010--Hb_002226_070 Hb_000656_170 Hb_000656_170 Hb_004032_010--Hb_000656_170 Hb_033834_040 Hb_033834_040 Hb_004032_010--Hb_033834_040 Hb_004032_010--Hb_005045_060 Hb_003108_020 Hb_003108_020 Hb_004032_010--Hb_003108_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.44544 4.54079 6.27682 8.26919 7.73806 14.5765
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.67075 16.216 12.4444 4.21386 2.90222

CAGE analysis