Hb_012762_050

Information

Type -
Description -
Location Contig12762: 30718-33714
Sequence    

Annotation

kegg
ID rcu:RCOM_0843370
description hypothetical protein
nr
ID XP_012072220.1
description PREDICTED: uncharacterized protein LOC105634060 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L0N5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04698 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012762_050 0.0 - - PREDICTED: uncharacterized protein LOC105634060 [Jatropha curcas]
2 Hb_135545_010 0.0538269266 - - calmodulin binding protein, putative [Ricinus communis]
3 Hb_000473_040 0.0611764133 transcription factor TF Family: Coactivator p15 PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like [Jatropha curcas]
4 Hb_000221_220 0.0727083724 - - PREDICTED: 40S ribosomal protein S6 [Jatropha curcas]
5 Hb_001512_070 0.0753779267 - - PREDICTED: ras-related protein RABB1b [Malus domestica]
6 Hb_002007_060 0.079552768 - - hypothetical protein JCGZ_23323 [Jatropha curcas]
7 Hb_011571_020 0.0796230561 - - PREDICTED: metal tolerance protein C4 [Jatropha curcas]
8 Hb_005332_070 0.0814742101 - - PREDICTED: uncharacterized protein LOC105632487 [Jatropha curcas]
9 Hb_003055_120 0.0817915257 - - Protein C20orf11, putative [Ricinus communis]
10 Hb_001301_160 0.0822132598 - - PREDICTED: CRS2-associated factor 2, mitochondrial [Jatropha curcas]
11 Hb_001828_090 0.083298311 - - prohibitin, putative [Ricinus communis]
12 Hb_000056_200 0.083346279 - - 40S ribosomal S9-2 -like protein [Gossypium arboreum]
13 Hb_003050_080 0.0855476129 - - 40S ribosomal protein S14, putative [Ricinus communis]
14 Hb_011609_100 0.0869740734 - - PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Jatropha curcas]
15 Hb_001252_110 0.0873314767 - - PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Jatropha curcas]
16 Hb_011360_140 0.0889313596 - - 40S ribosomal protein S19, putative [Ricinus communis]
17 Hb_063716_050 0.0892282478 - - PREDICTED: uncharacterized protein LOC105634866 [Jatropha curcas]
18 Hb_002868_010 0.0895327878 - - 60S ribosomal protein L30, putative [Ricinus communis]
19 Hb_003687_110 0.0897581578 - - PREDICTED: uncharacterized protein At4g14342 isoform X1 [Malus domestica]
20 Hb_000788_100 0.0902420069 - - PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Jatropha curcas]

Gene co-expression network

sample Hb_012762_050 Hb_012762_050 Hb_135545_010 Hb_135545_010 Hb_012762_050--Hb_135545_010 Hb_000473_040 Hb_000473_040 Hb_012762_050--Hb_000473_040 Hb_000221_220 Hb_000221_220 Hb_012762_050--Hb_000221_220 Hb_001512_070 Hb_001512_070 Hb_012762_050--Hb_001512_070 Hb_002007_060 Hb_002007_060 Hb_012762_050--Hb_002007_060 Hb_011571_020 Hb_011571_020 Hb_012762_050--Hb_011571_020 Hb_135545_010--Hb_000473_040 Hb_001301_160 Hb_001301_160 Hb_135545_010--Hb_001301_160 Hb_000139_350 Hb_000139_350 Hb_135545_010--Hb_000139_350 Hb_135545_010--Hb_002007_060 Hb_135545_010--Hb_011571_020 Hb_011360_140 Hb_011360_140 Hb_000473_040--Hb_011360_140 Hb_005332_070 Hb_005332_070 Hb_000473_040--Hb_005332_070 Hb_000473_040--Hb_002007_060 Hb_000473_040--Hb_011571_020 Hb_001828_090 Hb_001828_090 Hb_000221_220--Hb_001828_090 Hb_002603_100 Hb_002603_100 Hb_000221_220--Hb_002603_100 Hb_007426_230 Hb_007426_230 Hb_000221_220--Hb_007426_230 Hb_004195_160 Hb_004195_160 Hb_000221_220--Hb_004195_160 Hb_000221_220--Hb_011571_020 Hb_003939_080 Hb_003939_080 Hb_001512_070--Hb_003939_080 Hb_007101_150 Hb_007101_150 Hb_001512_070--Hb_007101_150 Hb_001512_070--Hb_001828_090 Hb_002868_010 Hb_002868_010 Hb_001512_070--Hb_002868_010 Hb_000684_090 Hb_000684_090 Hb_001512_070--Hb_000684_090 Hb_023226_040 Hb_023226_040 Hb_002007_060--Hb_023226_040 Hb_000866_270 Hb_000866_270 Hb_002007_060--Hb_000866_270 Hb_001259_090 Hb_001259_090 Hb_002007_060--Hb_001259_090 Hb_002007_060--Hb_001301_160 Hb_000000_160 Hb_000000_160 Hb_002007_060--Hb_000000_160 Hb_005539_350 Hb_005539_350 Hb_002007_060--Hb_005539_350 Hb_011571_020--Hb_011360_140 Hb_003001_140 Hb_003001_140 Hb_011571_020--Hb_003001_140 Hb_005993_040 Hb_005993_040 Hb_011571_020--Hb_005993_040 Hb_011571_020--Hb_001301_160 Hb_011571_020--Hb_005332_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.3759 9.85531 10.2157 7.75555 20.0876 18.9853
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.3895 33.2694 20.2667 6.0594 4.7778

CAGE analysis