Hb_009193_080

Information

Type -
Description -
Location Contig9193: 62130-63659
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009193_080 0.0 - - -
2 Hb_119960_010 0.0983986415 - - PREDICTED: pectinesterase-like [Populus euphratica]
3 Hb_003902_080 0.107224828 - - PREDICTED: senescence-specific cysteine protease SAG39-like [Populus euphratica]
4 Hb_006620_080 0.1744396736 - - hypothetical protein JCGZ_12043 [Jatropha curcas]
5 Hb_011364_030 0.1839053215 - - PREDICTED: U-box domain-containing protein 51 [Jatropha curcas]
6 Hb_032907_010 0.1982379768 - - PREDICTED: uncharacterized protein LOC105111046 [Populus euphratica]
7 Hb_036693_020 0.2404394711 - - PREDICTED: transcription factor DYT1 [Jatropha curcas]
8 Hb_000116_600 0.3018748959 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
9 Hb_063907_010 0.3203493012 - - -
10 Hb_003050_240 0.3356173006 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001341_140 0.3356595993 - - -
12 Hb_000794_040 0.341468994 - - PREDICTED: RING-H2 finger protein ATL29-like [Jatropha curcas]
13 Hb_000184_140 0.3423996635 - - conserved hypothetical protein [Ricinus communis]
14 Hb_123560_030 0.3426491141 - - UDP-glucosyltransferase, putative [Ricinus communis]
15 Hb_006663_110 0.3672165503 - - PREDICTED: U-box domain-containing protein 34-like [Camelina sativa]
16 Hb_000964_100 0.3681133963 - - PREDICTED: uncharacterized protein LOC105628699 [Jatropha curcas]
17 Hb_101705_020 0.3731351036 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000313_330 0.3913536443 - - PREDICTED: glucan endo-1,3-beta-glucosidase [Jatropha curcas]
19 Hb_001001_050 0.3955675963 - - CXE protein [Hevea brasiliensis]
20 Hb_006502_100 0.3956103159 - - hypothetical protein POPTR_0003s01580g [Populus trichocarpa]

Gene co-expression network

sample Hb_009193_080 Hb_009193_080 Hb_119960_010 Hb_119960_010 Hb_009193_080--Hb_119960_010 Hb_003902_080 Hb_003902_080 Hb_009193_080--Hb_003902_080 Hb_006620_080 Hb_006620_080 Hb_009193_080--Hb_006620_080 Hb_011364_030 Hb_011364_030 Hb_009193_080--Hb_011364_030 Hb_032907_010 Hb_032907_010 Hb_009193_080--Hb_032907_010 Hb_036693_020 Hb_036693_020 Hb_009193_080--Hb_036693_020 Hb_119960_010--Hb_006620_080 Hb_119960_010--Hb_011364_030 Hb_119960_010--Hb_003902_080 Hb_119960_010--Hb_032907_010 Hb_000116_600 Hb_000116_600 Hb_119960_010--Hb_000116_600 Hb_003902_080--Hb_036693_020 Hb_003050_240 Hb_003050_240 Hb_003902_080--Hb_003050_240 Hb_003902_080--Hb_032907_010 Hb_063907_010 Hb_063907_010 Hb_003902_080--Hb_063907_010 Hb_006620_080--Hb_011364_030 Hb_006620_080--Hb_032907_010 Hb_006620_080--Hb_003902_080 Hb_006620_080--Hb_000116_600 Hb_011364_030--Hb_032907_010 Hb_011364_030--Hb_003902_080 Hb_011364_030--Hb_000116_600 Hb_032907_010--Hb_000116_600 Hb_036693_020--Hb_003050_240 Hb_000579_160 Hb_000579_160 Hb_036693_020--Hb_000579_160 Hb_036693_020--Hb_063907_010 Hb_001341_140 Hb_001341_140 Hb_036693_020--Hb_001341_140 Hb_109187_010 Hb_109187_010 Hb_036693_020--Hb_109187_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0356583 0 0 0.0354767 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis