Hb_008226_060

Information

Type -
Description -
Location Contig8226: 38455-41926
Sequence    

Annotation

kegg
ID pop:POPTR_0008s09700g
description POPTRDRAFT_419321; hypothetical protein
nr
ID XP_012091146.1
description PREDICTED: folic acid synthesis protein fol1-like [Jatropha curcas]
swissprot
ID O04862
description Folate synthesis bifunctional protein, mitochondrial OS=Pisum sativum GN=MitHPPK/DHPS PE=1 SV=1
trembl
ID A0A067JFU0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03324 PE=4 SV=1
Gene Ontology
ID GO:0003848
description folic acid synthesis protein fol1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59647: 38443-41472
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008226_060 0.0 - - PREDICTED: folic acid synthesis protein fol1-like [Jatropha curcas]
2 Hb_003389_040 0.0486495105 - - PREDICTED: trafficking protein particle complex subunit 12 [Jatropha curcas]
3 Hb_007101_300 0.0618660409 - - PREDICTED: pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Jatropha curcas]
4 Hb_000032_380 0.0773031645 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002205_110 0.0799269929 - - conserved hypothetical protein [Ricinus communis]
6 Hb_010997_080 0.0843874808 transcription factor TF Family: mTERF unnamed protein product [Vitis vinifera]
7 Hb_000417_040 0.0850572218 - - PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
8 Hb_164010_040 0.0867546879 - - serine/threonine protein kinase, putative [Ricinus communis]
9 Hb_000331_670 0.0873772144 - - PREDICTED: protein tipD [Jatropha curcas]
10 Hb_001245_100 0.0877069759 transcription factor TF Family: Alfin-like ATP synthase alpha subunit mitochondrial, putative [Ricinus communis]
11 Hb_001205_240 0.0877278672 - - PREDICTED: uncharacterized protein LOC105645528 [Jatropha curcas]
12 Hb_000357_110 0.0891827944 - - PREDICTED: uncharacterized protein LOC105643970 isoform X2 [Jatropha curcas]
13 Hb_003151_040 0.0897684461 transcription factor TF Family: Alfin-like zinc finger family protein [Populus trichocarpa]
14 Hb_001123_060 0.0900781052 - - PREDICTED: ALBINO3-like protein 2, chloroplastic [Jatropha curcas]
15 Hb_000373_070 0.0902843604 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X2 [Jatropha curcas]
16 Hb_001278_100 0.090650466 - - PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Jatropha curcas]
17 Hb_000028_370 0.0908299494 - - Guanine nucleotide-binding protein alpha-2 subunit [Glycine soja]
18 Hb_001766_060 0.0913644732 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002754_010 0.0921450551 - - PREDICTED: uncharacterized protein DDB_G0271670 [Jatropha curcas]
20 Hb_005846_040 0.0929908773 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Populus euphratica]

Gene co-expression network

sample Hb_008226_060 Hb_008226_060 Hb_003389_040 Hb_003389_040 Hb_008226_060--Hb_003389_040 Hb_007101_300 Hb_007101_300 Hb_008226_060--Hb_007101_300 Hb_000032_380 Hb_000032_380 Hb_008226_060--Hb_000032_380 Hb_002205_110 Hb_002205_110 Hb_008226_060--Hb_002205_110 Hb_010997_080 Hb_010997_080 Hb_008226_060--Hb_010997_080 Hb_000417_040 Hb_000417_040 Hb_008226_060--Hb_000417_040 Hb_003389_040--Hb_007101_300 Hb_003389_040--Hb_000032_380 Hb_003389_040--Hb_000417_040 Hb_000357_110 Hb_000357_110 Hb_003389_040--Hb_000357_110 Hb_156635_010 Hb_156635_010 Hb_003389_040--Hb_156635_010 Hb_007101_300--Hb_000032_380 Hb_001225_080 Hb_001225_080 Hb_007101_300--Hb_001225_080 Hb_007101_300--Hb_000417_040 Hb_005489_060 Hb_005489_060 Hb_007101_300--Hb_005489_060 Hb_001278_100 Hb_001278_100 Hb_000032_380--Hb_001278_100 Hb_000032_380--Hb_000417_040 Hb_005054_350 Hb_005054_350 Hb_000032_380--Hb_005054_350 Hb_000028_370 Hb_000028_370 Hb_002205_110--Hb_000028_370 Hb_001205_240 Hb_001205_240 Hb_002205_110--Hb_001205_240 Hb_002232_410 Hb_002232_410 Hb_002205_110--Hb_002232_410 Hb_001408_040 Hb_001408_040 Hb_002205_110--Hb_001408_040 Hb_002205_110--Hb_010997_080 Hb_000441_140 Hb_000441_140 Hb_002205_110--Hb_000441_140 Hb_010997_080--Hb_000441_140 Hb_010997_080--Hb_000028_370 Hb_000173_490 Hb_000173_490 Hb_010997_080--Hb_000173_490 Hb_010997_080--Hb_003389_040 Hb_005048_130 Hb_005048_130 Hb_010997_080--Hb_005048_130 Hb_000406_080 Hb_000406_080 Hb_000417_040--Hb_000406_080 Hb_005846_040 Hb_005846_040 Hb_000417_040--Hb_005846_040 Hb_000032_270 Hb_000032_270 Hb_000417_040--Hb_000032_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.36664 5.68828 4.07867 5.87563 2.63509 6.21004
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.01945 7.95382 5.77283 3.86395 2.59789

CAGE analysis