Hb_007524_020

Information

Type -
Description -
Location Contig7524: 24586-26502
Sequence    

Annotation

kegg
ID rcu:RCOM_0927500
description monooxygenase, putative (EC:1.14.13.8)
nr
ID XP_012078643.1
description PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA4 [Jatropha curcas]
swissprot
ID Q9LFM5
description Probable indole-3-pyruvate monooxygenase YUCCA4 OS=Arabidopsis thaliana GN=YUC4 PE=1 SV=1
trembl
ID A0A067KKG2
description Flavin-containing monooxygenase OS=Jatropha curcas GN=JCGZ_13224 PE=3 SV=1
Gene Ontology
ID GO:0004499
description probable indole-3-pyruvate monooxygenase yucca4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56883: 24418-24899
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007524_020 0.0 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA4 [Jatropha curcas]
2 Hb_001300_110 0.0022190441 - - PREDICTED: bidirectional sugar transporter N3-like [Jatropha curcas]
3 Hb_000243_270 0.0032499327 - - Pectinesterase-2 precursor, putative [Ricinus communis]
4 Hb_000506_060 0.0036032779 - - PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease [Malus domestica]
5 Hb_003363_100 0.0059642473 - - -
6 Hb_064476_010 0.0072725071 - - PREDICTED: beta-Amyrin Synthase 1-like [Sesamum indicum]
7 Hb_168078_010 0.0089924356 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like, partial [Jatropha curcas]
8 Hb_013607_020 0.0112711698 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
9 Hb_027802_030 0.0116849956 transcription factor TF Family: HB hypothetical protein POPTR_0017s11800g [Populus trichocarpa]
10 Hb_000574_060 0.0127479996 - - hypothetical protein F775_19731 [Aegilops tauschii]
11 Hb_166937_010 0.0128724184 - - PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial-like [Jatropha curcas]
12 Hb_006469_100 0.0142931689 - - PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]
13 Hb_000771_010 0.0170201929 - - ubiquitin-protein ligase, putative [Ricinus communis]
14 Hb_001579_080 0.0209526427 - - serine/threonine protein kinase, putative [Ricinus communis]
15 Hb_141016_010 0.0227781302 - - hypothetical protein JCGZ_15085 [Jatropha curcas]
16 Hb_015754_010 0.0229754098 - - Galactose oxidase precursor, putative [Ricinus communis]
17 Hb_000185_190 0.0245069846 - - hypothetical protein L484_017526 [Morus notabilis]
18 Hb_004375_090 0.0262020922 - - hypothetical protein JCGZ_13971 [Jatropha curcas]
19 Hb_001031_130 0.0284868496 - - zinc finger protein, putative [Ricinus communis]
20 Hb_002081_110 0.0285780405 - - PREDICTED: uncharacterized protein LOC105129793 isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_007524_020 Hb_007524_020 Hb_001300_110 Hb_001300_110 Hb_007524_020--Hb_001300_110 Hb_000243_270 Hb_000243_270 Hb_007524_020--Hb_000243_270 Hb_000506_060 Hb_000506_060 Hb_007524_020--Hb_000506_060 Hb_003363_100 Hb_003363_100 Hb_007524_020--Hb_003363_100 Hb_064476_010 Hb_064476_010 Hb_007524_020--Hb_064476_010 Hb_168078_010 Hb_168078_010 Hb_007524_020--Hb_168078_010 Hb_001300_110--Hb_000243_270 Hb_001300_110--Hb_064476_010 Hb_001300_110--Hb_000506_060 Hb_001300_110--Hb_003363_100 Hb_013607_020 Hb_013607_020 Hb_001300_110--Hb_013607_020 Hb_000243_270--Hb_064476_010 Hb_000243_270--Hb_000506_060 Hb_000243_270--Hb_013607_020 Hb_000243_270--Hb_003363_100 Hb_000506_060--Hb_003363_100 Hb_000506_060--Hb_168078_010 Hb_027802_030 Hb_027802_030 Hb_000506_060--Hb_027802_030 Hb_003363_100--Hb_168078_010 Hb_003363_100--Hb_027802_030 Hb_000574_060 Hb_000574_060 Hb_003363_100--Hb_000574_060 Hb_064476_010--Hb_013607_020 Hb_166937_010 Hb_166937_010 Hb_064476_010--Hb_166937_010 Hb_000771_010 Hb_000771_010 Hb_064476_010--Hb_000771_010 Hb_168078_010--Hb_027802_030 Hb_168078_010--Hb_000574_060 Hb_006469_100 Hb_006469_100 Hb_168078_010--Hb_006469_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.470862 0.291096 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis