Hb_001300_110

Information

Type -
Description -
Location Contig1300: 88048-89393
Sequence    

Annotation

kegg
ID rcu:RCOM_0555720
description hypothetical protein
nr
ID XP_012083783.1
description PREDICTED: bidirectional sugar transporter N3-like [Jatropha curcas]
swissprot
ID Q9FGQ2
description Bidirectional sugar transporter SWEET13 OS=Arabidopsis thaliana GN=SWEET13 PE=2 SV=1
trembl
ID A0A067JZ44
description Sugar transporter SWEET OS=Jatropha curcas GN=JCGZ_13859 PE=3 SV=1
Gene Ontology
ID GO:0016021
description bidirectional sugar transporter sweet14-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001300_110 0.0 - - PREDICTED: bidirectional sugar transporter N3-like [Jatropha curcas]
2 Hb_000243_270 0.0010308915 - - Pectinesterase-2 precursor, putative [Ricinus communis]
3 Hb_007524_020 0.0022190441 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA4 [Jatropha curcas]
4 Hb_064476_010 0.0050534948 - - PREDICTED: beta-Amyrin Synthase 1-like [Sesamum indicum]
5 Hb_000506_060 0.005822304 - - PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease [Malus domestica]
6 Hb_003363_100 0.0081832496 - - -
7 Hb_013607_020 0.0090522142 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
8 Hb_166937_010 0.0106534935 - - PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial-like [Jatropha curcas]
9 Hb_168078_010 0.0112113935 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like, partial [Jatropha curcas]
10 Hb_027802_030 0.013903901 transcription factor TF Family: HB hypothetical protein POPTR_0017s11800g [Populus trichocarpa]
11 Hb_000771_010 0.0148013684 - - ubiquitin-protein ligase, putative [Ricinus communis]
12 Hb_000574_060 0.0149668809 - - hypothetical protein F775_19731 [Aegilops tauschii]
13 Hb_006469_100 0.0165120118 - - PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]
14 Hb_001579_080 0.0187339419 - - serine/threonine protein kinase, putative [Ricinus communis]
15 Hb_015754_010 0.0207567835 - - Galactose oxidase precursor, putative [Ricinus communis]
16 Hb_000185_190 0.0222884196 - - hypothetical protein L484_017526 [Morus notabilis]
17 Hb_141016_010 0.0249966918 - - hypothetical protein JCGZ_15085 [Jatropha curcas]
18 Hb_001031_130 0.0262684639 - - zinc finger protein, putative [Ricinus communis]
19 Hb_002081_110 0.0263596593 - - PREDICTED: uncharacterized protein LOC105129793 isoform X1 [Populus euphratica]
20 Hb_004375_090 0.0284205067 - - hypothetical protein JCGZ_13971 [Jatropha curcas]

Gene co-expression network

sample Hb_001300_110 Hb_001300_110 Hb_000243_270 Hb_000243_270 Hb_001300_110--Hb_000243_270 Hb_007524_020 Hb_007524_020 Hb_001300_110--Hb_007524_020 Hb_064476_010 Hb_064476_010 Hb_001300_110--Hb_064476_010 Hb_000506_060 Hb_000506_060 Hb_001300_110--Hb_000506_060 Hb_003363_100 Hb_003363_100 Hb_001300_110--Hb_003363_100 Hb_013607_020 Hb_013607_020 Hb_001300_110--Hb_013607_020 Hb_000243_270--Hb_007524_020 Hb_000243_270--Hb_064476_010 Hb_000243_270--Hb_000506_060 Hb_000243_270--Hb_013607_020 Hb_000243_270--Hb_003363_100 Hb_007524_020--Hb_000506_060 Hb_007524_020--Hb_003363_100 Hb_007524_020--Hb_064476_010 Hb_168078_010 Hb_168078_010 Hb_007524_020--Hb_168078_010 Hb_064476_010--Hb_013607_020 Hb_166937_010 Hb_166937_010 Hb_064476_010--Hb_166937_010 Hb_000771_010 Hb_000771_010 Hb_064476_010--Hb_000771_010 Hb_000506_060--Hb_003363_100 Hb_000506_060--Hb_168078_010 Hb_027802_030 Hb_027802_030 Hb_000506_060--Hb_027802_030 Hb_003363_100--Hb_168078_010 Hb_003363_100--Hb_027802_030 Hb_000574_060 Hb_000574_060 Hb_003363_100--Hb_000574_060 Hb_013607_020--Hb_166937_010 Hb_013607_020--Hb_000771_010 Hb_001579_080 Hb_001579_080 Hb_013607_020--Hb_001579_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0860566 0.0526324 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis