Hb_166937_010

Information

Type -
Description -
Location Contig166937: 630-2121
Sequence    

Annotation

kegg
ID pop:POPTR_0003s07570g
description POPTRDRAFT_646120; hypothetical protein
nr
ID XP_012070010.1
description PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial-like [Jatropha curcas]
swissprot
ID Q93YQ3
description Formyltetrahydrofolate deformylase 1, mitochondrial OS=Arabidopsis thaliana GN=PURU1 PE=1 SV=1
trembl
ID A0A067KUK0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03417 PE=4 SV=1
Gene Ontology
ID GO:0005739
description formyltetrahydrofolate deformylase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_166937_010 0.0 - - PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial-like [Jatropha curcas]
2 Hb_013607_020 0.0016013403 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
3 Hb_000771_010 0.0041481346 - - ubiquitin-protein ligase, putative [Ricinus communis]
4 Hb_064476_010 0.0056001175 - - PREDICTED: beta-Amyrin Synthase 1-like [Sesamum indicum]
5 Hb_001579_080 0.0080810906 - - serine/threonine protein kinase, putative [Ricinus communis]
6 Hb_000243_270 0.0096226435 - - Pectinesterase-2 precursor, putative [Ricinus communis]
7 Hb_015754_010 0.0101041812 - - Galactose oxidase precursor, putative [Ricinus communis]
8 Hb_001300_110 0.0106534935 - - PREDICTED: bidirectional sugar transporter N3-like [Jatropha curcas]
9 Hb_000185_190 0.0116360295 - - hypothetical protein L484_017526 [Morus notabilis]
10 Hb_007524_020 0.0128724184 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA4 [Jatropha curcas]
11 Hb_001031_130 0.0156167214 - - zinc finger protein, putative [Ricinus communis]
12 Hb_002081_110 0.0157079332 - - PREDICTED: uncharacterized protein LOC105129793 isoform X1 [Populus euphratica]
13 Hb_000506_060 0.0164753982 - - PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease [Malus domestica]
14 Hb_171420_010 0.0182456136 - - hypothetical protein AMTR_s00126p00056890 [Amborella trichopoda]
15 Hb_003363_100 0.0188361026 - - -
16 Hb_000042_410 0.0191528892 - - Patatin precursor, putative [Ricinus communis]
17 Hb_014549_030 0.0196727266 - - receptor-kinase, putative [Ricinus communis]
18 Hb_004994_270 0.0205038903 - - PREDICTED: tRNA-specific adenosine deaminase 1 isoform X2 [Jatropha curcas]
19 Hb_168078_010 0.0218638707 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like, partial [Jatropha curcas]
20 Hb_027802_030 0.0245559818 transcription factor TF Family: HB hypothetical protein POPTR_0017s11800g [Populus trichocarpa]

Gene co-expression network

sample Hb_166937_010 Hb_166937_010 Hb_013607_020 Hb_013607_020 Hb_166937_010--Hb_013607_020 Hb_000771_010 Hb_000771_010 Hb_166937_010--Hb_000771_010 Hb_064476_010 Hb_064476_010 Hb_166937_010--Hb_064476_010 Hb_001579_080 Hb_001579_080 Hb_166937_010--Hb_001579_080 Hb_000243_270 Hb_000243_270 Hb_166937_010--Hb_000243_270 Hb_015754_010 Hb_015754_010 Hb_166937_010--Hb_015754_010 Hb_013607_020--Hb_064476_010 Hb_013607_020--Hb_000771_010 Hb_013607_020--Hb_000243_270 Hb_001300_110 Hb_001300_110 Hb_013607_020--Hb_001300_110 Hb_013607_020--Hb_001579_080 Hb_000771_010--Hb_001579_080 Hb_000771_010--Hb_015754_010 Hb_000185_190 Hb_000185_190 Hb_000771_010--Hb_000185_190 Hb_000771_010--Hb_064476_010 Hb_064476_010--Hb_000243_270 Hb_064476_010--Hb_001300_110 Hb_007524_020 Hb_007524_020 Hb_064476_010--Hb_007524_020 Hb_001579_080--Hb_015754_010 Hb_001579_080--Hb_000185_190 Hb_001031_130 Hb_001031_130 Hb_001579_080--Hb_001031_130 Hb_002081_110 Hb_002081_110 Hb_001579_080--Hb_002081_110 Hb_000243_270--Hb_001300_110 Hb_000243_270--Hb_007524_020 Hb_000506_060 Hb_000506_060 Hb_000243_270--Hb_000506_060 Hb_003363_100 Hb_003363_100 Hb_000243_270--Hb_003363_100 Hb_015754_010--Hb_000185_190 Hb_015754_010--Hb_001031_130 Hb_015754_010--Hb_002081_110 Hb_171420_010 Hb_171420_010 Hb_015754_010--Hb_171420_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.16216 0.0941646 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis