Hb_007219_010

Information

Type -
Description -
Location Contig7219: 37700-40903
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007219_010 0.0 - - -
2 Hb_059280_010 0.0071069927 - - hypothetical protein POPTR_0019s02860g [Populus trichocarpa]
3 Hb_002276_110 0.0099912498 - - protein binding protein, putative [Ricinus communis]
4 Hb_000574_080 0.0315121273 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
5 Hb_001627_070 0.0403982253 transcription factor TF Family: MIKC PREDICTED: developmental protein SEPALLATA 1 [Nelumbo nucifera]
6 Hb_004567_080 0.041733662 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
7 Hb_004643_030 0.0417958077 - - conserved hypothetical protein [Ricinus communis]
8 Hb_177343_020 0.0481866533 - - PREDICTED: uncharacterized protein LOC104751876 [Camelina sativa]
9 Hb_000627_060 0.0536055521 - - -
10 Hb_012184_020 0.0543820028 - - conserved hypothetical protein [Ricinus communis]
11 Hb_007741_060 0.056554331 - - PREDICTED: putative lipid-binding protein At4g00165 [Jatropha curcas]
12 Hb_002395_010 0.0587685071 - - -
13 Hb_002704_090 0.0587876693 - - cytochrome P450, putative [Ricinus communis]
14 Hb_005622_090 0.0609709773 - - hypothetical protein CICLE_v10027074mg [Citrus clementina]
15 Hb_002093_010 0.0624483377 - - PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
16 Hb_004161_040 0.0626643686 - - PREDICTED: putative receptor-like protein kinase At4g00960 [Populus euphratica]
17 Hb_035265_020 0.0630860471 - - ankyrin repeat-containing protein, putative [Ricinus communis]
18 Hb_006435_020 0.0635578579 - - sugar transporter, putative [Ricinus communis]
19 Hb_000648_090 0.073824942 - - -
20 Hb_003144_040 0.0751931156 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]

Gene co-expression network

sample Hb_007219_010 Hb_007219_010 Hb_059280_010 Hb_059280_010 Hb_007219_010--Hb_059280_010 Hb_002276_110 Hb_002276_110 Hb_007219_010--Hb_002276_110 Hb_000574_080 Hb_000574_080 Hb_007219_010--Hb_000574_080 Hb_001627_070 Hb_001627_070 Hb_007219_010--Hb_001627_070 Hb_004567_080 Hb_004567_080 Hb_007219_010--Hb_004567_080 Hb_004643_030 Hb_004643_030 Hb_007219_010--Hb_004643_030 Hb_059280_010--Hb_002276_110 Hb_059280_010--Hb_004567_080 Hb_059280_010--Hb_004643_030 Hb_059280_010--Hb_000574_080 Hb_177343_020 Hb_177343_020 Hb_059280_010--Hb_177343_020 Hb_002276_110--Hb_004567_080 Hb_002276_110--Hb_004643_030 Hb_002276_110--Hb_177343_020 Hb_002276_110--Hb_000574_080 Hb_000574_080--Hb_001627_070 Hb_012184_020 Hb_012184_020 Hb_000574_080--Hb_012184_020 Hb_002395_010 Hb_002395_010 Hb_000574_080--Hb_002395_010 Hb_005622_090 Hb_005622_090 Hb_000574_080--Hb_005622_090 Hb_001627_070--Hb_012184_020 Hb_001627_070--Hb_002395_010 Hb_001627_070--Hb_005622_090 Hb_001627_070--Hb_059280_010 Hb_004567_080--Hb_004643_030 Hb_004567_080--Hb_177343_020 Hb_035265_020 Hb_035265_020 Hb_004567_080--Hb_035265_020 Hb_000648_090 Hb_000648_090 Hb_004567_080--Hb_000648_090 Hb_007741_060 Hb_007741_060 Hb_004567_080--Hb_007741_060 Hb_004643_030--Hb_177343_020 Hb_004643_030--Hb_035265_020 Hb_004643_030--Hb_000648_090 Hb_004643_030--Hb_007741_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.254471 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 5.40604

CAGE analysis