Hb_006973_030

Information

Type -
Description -
Location Contig6973: 21973-28617
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006973_030 0.0 - - -
2 Hb_004953_020 0.2419041022 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
3 Hb_008153_020 0.242020145 - - -
4 Hb_000286_240 0.2424959788 - - -
5 Hb_002035_060 0.2529524314 - - -
6 Hb_003878_040 0.2618956459 - - -
7 Hb_149181_020 0.2643417136 - - -
8 Hb_018264_010 0.2645503966 - - PREDICTED: uncharacterized protein LOC105630996 [Jatropha curcas]
9 Hb_001422_040 0.2647663493 - - PREDICTED: uncharacterized protein LOC105803109 [Gossypium raimondii]
10 Hb_036609_010 0.274931855 - - hypothetical protein JCGZ_22461 [Jatropha curcas]
11 Hb_007416_130 0.2799652682 - - PREDICTED: UDP-glycosyltransferase 73B4-like [Jatropha curcas]
12 Hb_005109_030 0.2806907568 - - PREDICTED: metal tolerance protein C2 [Jatropha curcas]
13 Hb_001279_160 0.2948911652 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000212_220 0.2960040729 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
15 Hb_006775_010 0.298021154 transcription factor TF Family: M-type AGAMOUS [Populus yunnanensis]
16 Hb_000069_680 0.3052856091 - - -
17 Hb_019093_010 0.3069153496 - - PREDICTED: uncharacterized protein LOC105766879 [Gossypium raimondii]
18 Hb_000011_430 0.3178332019 - - zinc finger protein, putative [Ricinus communis]
19 Hb_007181_010 0.3390998412 - - polyphenol oxidase [Hevea brasiliensis]
20 Hb_010728_010 0.3449444906 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]

Gene co-expression network

sample Hb_006973_030 Hb_006973_030 Hb_004953_020 Hb_004953_020 Hb_006973_030--Hb_004953_020 Hb_008153_020 Hb_008153_020 Hb_006973_030--Hb_008153_020 Hb_000286_240 Hb_000286_240 Hb_006973_030--Hb_000286_240 Hb_002035_060 Hb_002035_060 Hb_006973_030--Hb_002035_060 Hb_003878_040 Hb_003878_040 Hb_006973_030--Hb_003878_040 Hb_149181_020 Hb_149181_020 Hb_006973_030--Hb_149181_020 Hb_004953_020--Hb_008153_020 Hb_004953_020--Hb_000286_240 Hb_004953_020--Hb_002035_060 Hb_004953_020--Hb_003878_040 Hb_004953_020--Hb_149181_020 Hb_018264_010 Hb_018264_010 Hb_004953_020--Hb_018264_010 Hb_008153_020--Hb_000286_240 Hb_008153_020--Hb_002035_060 Hb_008153_020--Hb_003878_040 Hb_008153_020--Hb_149181_020 Hb_008153_020--Hb_018264_010 Hb_000286_240--Hb_003878_040 Hb_000286_240--Hb_149181_020 Hb_000286_240--Hb_018264_010 Hb_001422_040 Hb_001422_040 Hb_000286_240--Hb_001422_040 Hb_002035_060--Hb_000286_240 Hb_001279_160 Hb_001279_160 Hb_002035_060--Hb_001279_160 Hb_002035_060--Hb_003878_040 Hb_002035_060--Hb_149181_020 Hb_003878_040--Hb_149181_020 Hb_003878_040--Hb_018264_010 Hb_003878_040--Hb_001422_040 Hb_036609_010 Hb_036609_010 Hb_003878_040--Hb_036609_010 Hb_005109_030 Hb_005109_030 Hb_003878_040--Hb_005109_030 Hb_000212_220 Hb_000212_220 Hb_003878_040--Hb_000212_220 Hb_149181_020--Hb_018264_010 Hb_149181_020--Hb_001422_040 Hb_149181_020--Hb_036609_010 Hb_149181_020--Hb_005109_030 Hb_149181_020--Hb_000212_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0206119 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0629937 0 0 0.100076 0

CAGE analysis