Hb_001377_140

Information

Type -
Description -
Location Contig1377: 128354-128879
Sequence    

Annotation

kegg
ID rcu:RCOM_0718610
description Nonspecific lipid-transfer protein 3 precursor, putative
nr
ID EYU32232.1
description hypothetical protein MIMGU_mgv1a016697mg [Erythranthe guttata]
swissprot
ID O04004
description Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia PE=1 SV=1
trembl
ID A0A022QU64
description Non-specific lipid-transfer protein OS=Erythranthe guttata GN=MIMGU_mgv1a016697mg PE=3 SV=1
Gene Ontology
ID GO:0008289
description non-specific lipid-transfer

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001377_140 0.0 - - hypothetical protein MIMGU_mgv1a016697mg [Erythranthe guttata]
2 Hb_002254_020 0.0024713364 transcription factor TF Family: GRAS PREDICTED: nodulation-signaling pathway 2 protein-like [Jatropha curcas]
3 Hb_003792_010 0.0042197418 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003531_110 0.0090343009 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
5 Hb_102933_010 0.0097038089 - - Pectate lyase precursor, putative [Ricinus communis]
6 Hb_000140_010 0.0103735057 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
7 Hb_000152_690 0.0148741475 - - PREDICTED: uncharacterized protein LOC105648869 [Jatropha curcas]
8 Hb_009225_030 0.0164260509 - - ring finger protein, putative [Ricinus communis]
9 Hb_104011_010 0.0170480541 - - PREDICTED: serine carboxypeptidase-like 18 [Jatropha curcas]
10 Hb_010543_010 0.0176256115 - - Phospholipid-transporting ATPase, putative [Ricinus communis]
11 Hb_001946_090 0.0186684544 - - -
12 Hb_185246_010 0.018947532 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
13 Hb_121058_010 0.019003007 - - ATP binding protein, putative [Ricinus communis]
14 Hb_001456_010 0.0206669085 - - o-methyltransferase, putative [Ricinus communis]
15 Hb_001504_250 0.0220630231 - - ABC transporter family protein [Hevea brasiliensis]
16 Hb_005065_090 0.0237333205 - - zinc/iron transporter, putative [Ricinus communis]
17 Hb_000760_090 0.0239745558 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-6 [Vitis vinifera]
18 Hb_001488_170 0.0274263978 - - PREDICTED: transcription initiation factor IIB-like [Jatropha curcas]
19 Hb_045150_010 0.0274557746 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
20 Hb_001645_080 0.0294241091 transcription factor TF Family: C2H2 palmate-like pentafoliata 1 transcription factor [Manihot esculenta]

Gene co-expression network

sample Hb_001377_140 Hb_001377_140 Hb_002254_020 Hb_002254_020 Hb_001377_140--Hb_002254_020 Hb_003792_010 Hb_003792_010 Hb_001377_140--Hb_003792_010 Hb_003531_110 Hb_003531_110 Hb_001377_140--Hb_003531_110 Hb_102933_010 Hb_102933_010 Hb_001377_140--Hb_102933_010 Hb_000140_010 Hb_000140_010 Hb_001377_140--Hb_000140_010 Hb_000152_690 Hb_000152_690 Hb_001377_140--Hb_000152_690 Hb_002254_020--Hb_003792_010 Hb_002254_020--Hb_102933_010 Hb_002254_020--Hb_003531_110 Hb_002254_020--Hb_000152_690 Hb_002254_020--Hb_000140_010 Hb_003792_010--Hb_102933_010 Hb_003792_010--Hb_000152_690 Hb_003792_010--Hb_003531_110 Hb_010543_010 Hb_010543_010 Hb_003792_010--Hb_010543_010 Hb_003531_110--Hb_000140_010 Hb_009225_030 Hb_009225_030 Hb_003531_110--Hb_009225_030 Hb_104011_010 Hb_104011_010 Hb_003531_110--Hb_104011_010 Hb_185246_010 Hb_185246_010 Hb_003531_110--Hb_185246_010 Hb_121058_010 Hb_121058_010 Hb_003531_110--Hb_121058_010 Hb_102933_010--Hb_000152_690 Hb_102933_010--Hb_010543_010 Hb_001946_090 Hb_001946_090 Hb_102933_010--Hb_001946_090 Hb_000140_010--Hb_009225_030 Hb_000140_010--Hb_104011_010 Hb_000140_010--Hb_185246_010 Hb_000140_010--Hb_121058_010 Hb_001456_010 Hb_001456_010 Hb_000140_010--Hb_001456_010 Hb_000152_690--Hb_010543_010 Hb_000152_690--Hb_001946_090 Hb_005065_090 Hb_005065_090 Hb_000152_690--Hb_005065_090 Hb_000760_090 Hb_000760_090 Hb_000152_690--Hb_000760_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.275831 0.264732 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis